Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.78□□□□□ -1.8
RPA3P35244 RNU6-1218P-201ENST00000458990 108 ntBASIC3.78□□□□□ -1.8
RPA3P35244 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.78□□□□□ -1.8
RPA3P35244 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.78□□□□□ -1.8
RPA3P35244 AC017007.3-201ENST00000479865 435 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 AC010627.1-201ENST00000503819 1294 ntBASIC3.78□□□□□ -1.8
RPA3P35244 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.78□□□□□ -1.8
RPA3P35244 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 RN7SKP21-201ENST00000516503 220 ntBASIC3.78□□□□□ -1.8
RPA3P35244 NDUFA5P2-201ENST00000519723 344 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.78□□□□□ -1.8
RPA3P35244 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.78□□□□□ -1.8
RPA3P35244 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.78□□□□□ -1.8
RPA3P35244 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
RPA3P35244 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.78□□□□□ -1.8
RPA3P35244 MIR3160-1-201ENST00000577972 85 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AC053481.4-201ENST00000583164 216 ntBASIC3.78□□□□□ -1.8
RPA3P35244 FAM60CP-201ENST00000591086 664 ntBASIC3.78□□□□□ -1.8
RPA3P35244 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 KLKP1-201ENST00000595979 403 ntBASIC3.78□□□□□ -1.8
RPA3P35244 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.78□□□□□ -1.8
RPA3P35244 AC015726.1-201ENST00000602353 681 ntBASIC3.78□□□□□ -1.8
RPA3P35244 PSMA6P4-201ENST00000603247 718 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AC084373.1-201ENST00000603311 235 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AC110741.2-201ENST00000605278 268 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.78□□□□□ -1.8
RPA3P35244 AC068831.8-201ENST00000620171 435 ntBASIC3.78□□□□□ -1.8
RPA3P35244 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.78□□□□□ -1.8
RPA3P35244 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.81
RPA3P35244 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.77□□□□□ -1.81
RPA3P35244 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.77□□□□□ -1.81
RPA3P35244 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.77□□□□□ -1.81
RPA3P35244 AC240504.1-201ENST00000395709 845 ntBASIC3.77□□□□□ -1.81
RPA3P35244 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 CYP4F29P-201ENST00000420685 446 ntBASIC3.77□□□□□ -1.81
RPA3P35244 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.77□□□□□ -1.81
RPA3P35244 AC007064.3-201ENST00000422608 359 ntBASIC3.77□□□□□ -1.81
RPA3P35244 RPL7P2-201ENST00000427639 268 ntBASIC3.77□□□□□ -1.81
RPA3P35244 MTCO3P21-201ENST00000430791 643 ntBASIC3.77□□□□□ -1.81
RPA3P35244 NDUFB1P1-201ENST00000435191 180 ntBASIC3.77□□□□□ -1.81
RPA3P35244 Z74696.2-201ENST00000436514 498 ntBASIC3.77□□□□□ -1.81
RPA3P35244 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.77□□□□□ -1.81
RPA3P35244 RPL31P53-201ENST00000457065 348 ntBASIC3.77□□□□□ -1.81
RPA3P35244 AC021205.1-201ENST00000468797 348 ntBASIC3.77□□□□□ -1.81
RPA3P35244 VN1R105P-201ENST00000486595 910 ntBASIC3.77□□□□□ -1.81
RPA3P35244 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.77□□□□□ -1.81
RPA3P35244 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.77□□□□□ -1.81
RPA3P35244 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.77□□□□□ -1.81
RPA3P35244 AC025857.1-201ENST00000525252 377 ntBASIC3.77□□□□□ -1.81
RPA3P35244 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.77□□□□□ -1.81
RPA3P35244 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.77□□□□□ -1.81
RPA3P35244 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.77□□□□□ -1.81
RPA3P35244 VN1R85P-201ENST00000601587 426 ntBASIC3.77□□□□□ -1.81
RPA3P35244 RNVU1-4-201ENST00000612985 164 ntBASIC3.77□□□□□ -1.81
RPA3P35244 AL133370.2-201ENST00000619934 439 ntBASIC3.77□□□□□ -1.81
RPA3P35244 AC092159.4-201ENST00000624944 550 ntBASIC3.77□□□□□ -1.81
RPA3P35244 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.77□□□□□ -1.81
RPA3P35244 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
RPA3P35244 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 AL049555.1-201ENST00000562834 1933 ntBASIC3.77□□□□□ -1.81
RPA3P35244 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RPA3P35244 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RPA3P35244 AC026951.1-201ENST00000559530 2459 ntBASIC3.76□□□□□ -1.81
RPA3P35244 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RPA3P35244 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPA3P35244 RNU6-984P-201ENST00000363236 109 ntBASIC3.76□□□□□ -1.81
RPA3P35244 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.76□□□□□ -1.81
RPA3P35244 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
RPA3P35244 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RPA3P35244 SNORA57.3-201ENST00000411095 141 ntBASIC3.76□□□□□ -1.81
RPA3P35244 AC073464.3-201ENST00000422564 712 ntBASIC3.76□□□□□ -1.81
RPA3P35244 AC093698.1-201ENST00000423843 571 ntBASIC3.76□□□□□ -1.81
RPA3P35244 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RPA3P35244 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.76□□□□□ -1.81
RPA3P35244 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.76□□□□□ -1.81
RPA3P35244 OR9M1P-201ENST00000459641 921 ntBASIC3.76□□□□□ -1.81
RPA3P35244 AC004801.2-202ENST00000463559 283 ntBASIC3.76□□□□□ -1.81
RPA3P35244 RN7SL132P-201ENST00000478131 296 ntBASIC3.76□□□□□ -1.81
RPA3P35244 RPS3AP50-201ENST00000487064 803 ntBASIC3.76□□□□□ -1.81
RPA3P35244 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.76□□□□□ -1.81
RPA3P35244 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.76□□□□□ -1.81
RPA3P35244 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.76□□□□□ -1.81
RPA3P35244 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.76□□□□□ -1.81
RPA3P35244 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.76□□□□□ -1.81
RPA3P35244 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.76□□□□□ -1.81
RPA3P35244 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.76□□□□□ -1.81
RPA3P35244 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.76□□□□□ -1.81
RPA3P35244 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms