Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.12□□□□□ -1.75
RETP07949 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RETP07949 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RETP07949 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.12□□□□□ -1.75
RETP07949 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RETP07949 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 OR4A15-201ENST00000314706 1035 ntBASIC4.12□□□□□ -1.75
RETP07949 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
RETP07949 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.12□□□□□ -1.75
RETP07949 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.12□□□□□ -1.75
RETP07949 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.12□□□□□ -1.75
RETP07949 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.12□□□□□ -1.75
RETP07949 AC068533.1-201ENST00000418542 415 ntBASIC4.12□□□□□ -1.75
RETP07949 HSFY1P1-201ENST00000423928 1178 ntBASIC4.12□□□□□ -1.75
RETP07949 AC073069.1-201ENST00000428657 441 ntBASIC4.12□□□□□ -1.75
RETP07949 NPM1P34-201ENST00000428821 893 ntBASIC4.12□□□□□ -1.75
RETP07949 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.12□□□□□ -1.75
RETP07949 HMGB3P21-201ENST00000452483 547 ntBASIC4.12□□□□□ -1.75
RETP07949 PLGLA-201ENST00000465668 449 ntBASIC4.12□□□□□ -1.75
RETP07949 AF213884.1-201ENST00000488102 463 ntBASIC4.12□□□□□ -1.75
RETP07949 AC017037.1-201ENST00000508460 471 ntBASIC4.12□□□□□ -1.75
RETP07949 AC147055.1-201ENST00000509261 750 ntBASIC4.12□□□□□ -1.75
RETP07949 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.12□□□□□ -1.75
RETP07949 IGKV2D-23-201ENST00000518179 286 ntBASIC4.12□□□□□ -1.75
RETP07949 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.12□□□□□ -1.75
RETP07949 TRAV11-201ENST00000539512 339 ntBASIC4.12□□□□□ -1.75
RETP07949 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.12□□□□□ -1.75
RETP07949 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.12□□□□□ -1.75
RETP07949 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.12□□□□□ -1.75
RETP07949 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.12□□□□□ -1.75
RETP07949 AC005972.3-201ENST00000606304 481 ntBASIC4.12□□□□□ -1.75
RETP07949 AC015922.4-201ENST00000612568 690 ntBASIC4.12□□□□□ -1.75
RETP07949 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
RETP07949 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
RETP07949 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.12□□□□□ -1.75
RETP07949 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.12□□□□□ -1.75
RETP07949 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RETP07949 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.12□□□□□ -1.75
RETP07949 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.11□□□□□ -1.75
RETP07949 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RETP07949 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.11□□□□□ -1.75
RETP07949 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
RETP07949 RNU2-65P-201ENST00000410162 185 ntBASIC4.11□□□□□ -1.75
RETP07949 Z92545.1-201ENST00000411782 234 ntBASIC4.11□□□□□ -1.75
RETP07949 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.11□□□□□ -1.75
RETP07949 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.11□□□□□ -1.75
RETP07949 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.11□□□□□ -1.75
RETP07949 PPIAP17-201ENST00000438507 471 ntBASIC4.11□□□□□ -1.75
RETP07949 OR9M1P-201ENST00000459641 921 ntBASIC4.11□□□□□ -1.75
RETP07949 RN7SL585P-201ENST00000470538 280 ntBASIC4.11□□□□□ -1.75
RETP07949 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.11□□□□□ -1.75
RETP07949 AC139783.2-201ENST00000504847 1145 ntBASIC4.11□□□□□ -1.75
RETP07949 HAUS1P1-201ENST00000505275 832 ntBASIC4.11□□□□□ -1.75
RETP07949 GMPSP1-201ENST00000514075 579 ntBASIC4.11□□□□□ -1.75
RETP07949 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.11□□□□□ -1.75
RETP07949 OR4C2P-201ENST00000530855 1064 ntBASIC4.11□□□□□ -1.75
RETP07949 CYCSP30-201ENST00000546447 172 ntBASIC4.11□□□□□ -1.75
RETP07949 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.11□□□□□ -1.75
RETP07949 AC009101.1-201ENST00000568135 242 ntBASIC4.11□□□□□ -1.75
RETP07949 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.11□□□□□ -1.75
RETP07949 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.11□□□□□ -1.75
RETP07949 AC011471.1-201ENST00000585766 187 ntBASIC4.11□□□□□ -1.75
RETP07949 AC117490.2-201ENST00000610042 594 ntBASIC4.11□□□□□ -1.75
RETP07949 AC138907.10-201ENST00000623708 983 ntBASIC4.11□□□□□ -1.75
RETP07949 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.11□□□□□ -1.75
RETP07949 CFTRP2-201ENST00000634304 199 ntBASIC4.11□□□□□ -1.75
RETP07949 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
RETP07949 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
RETP07949 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.11□□□□□ -1.75
RETP07949 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RETP07949 EXOC5P1-201ENST00000510543 1969 ntBASIC4.11□□□□□ -1.75
RETP07949 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RETP07949 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
RETP07949 AC090229.1-201ENST00000590983 1609 ntBASIC4.1□□□□□ -1.75
RETP07949 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.1□□□□□ -1.75
RETP07949 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RETP07949 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RETP07949 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RETP07949 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RETP07949 SNORA5A-201ENST00000384111 134 ntBASIC4.1□□□□□ -1.75
RETP07949 AMD1P2-201ENST00000412936 992 ntBASIC4.1□□□□□ -1.75
RETP07949 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms