Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SLC25A36P1-201ENST00000590111 465 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC107993.1-201ENST00000591343 684 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC087241.4-201ENST00000612441 480 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC015922.4-201ENST00000612568 690 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC010149.2-201ENST00000637608 315 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
SPTA1P02549 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.33□□□□□ -1.88
SPTA1P02549 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTA1P02549 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTA1P02549 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTA1P02549 RNU6-729P-201ENST00000384399 107 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC073508.1-201ENST00000428866 656 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.33□□□□□ -1.88
SPTA1P02549 FTH1P1-201ENST00000437933 532 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 NPM1P13-201ENST00000452663 865 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AP001207.2-201ENST00000519490 539 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 OR5M7P-201ENST00000526140 972 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC016839.1-201ENST00000578162 867 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 RPL23AP92-201ENST00000603609 255 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AC128687.2-201ENST00000609657 566 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.33□□□□□ -1.88
SPTA1P02549 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.33□□□□□ -1.88
SPTA1P02549 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SPTA1P02549 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SPTA1P02549 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SPTA1P02549 RNU4-82P-201ENST00000362443 140 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 SNORA54-201ENST00000384281 123 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 RPL7P24-201ENST00000493052 752 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.32□□□□□ -1.88
SPTA1P02549 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.32□□□□□ -1.88
SPTA1P02549 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.32□□□□□ -1.88
SPTA1P02549 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 AC125494.3-201ENST00000602759 455 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 AL390816.3-201ENST00000604527 1066 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.32□□□□□ -1.88
SPTA1P02549 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.32□□□□□ -1.88
SPTA1P02549 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 DHX9P1-201ENST00000436565 3076 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 AC007823.1-201ENST00000569932 1566 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 MAPK10-349ENST00000641767 3661 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 RNU6-304P-201ENST00000364855 107 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 RPL7P60-201ENST00000397636 735 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 OR52Y1P-201ENST00000452418 828 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 U3.44-201ENST00000458938 192 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 UBL5P3-201ENST00000475112 231 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 RPS4XP18-201ENST00000495480 763 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.32□□□□□ -1.88
SPTA1P02549 RPL21P7-201ENST00000557463 483 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 AC015802.5-201ENST00000607478 399 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 ATP5A1P2-202ENST00000616464 443 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 AC097504.1-201ENST00000515103 2415 ntBASIC3.32□□□□□ -1.88
SPTA1P02549 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SPTA1P02549 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SPTA1P02549 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
SPTA1P02549 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.31□□□□□ -1.88
SPTA1P02549 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 RPF2P1-201ENST00000424137 906 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 SNORA71B-202ENST00000439232 272 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 MTND6P32-201ENST00000457611 483 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.31□□□□□ -1.88
SPTA1P02549 AC012603.1-201ENST00000606424 528 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 AC005086.4-201ENST00000623065 213 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AC010480.1-201ENST00000624823 684 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AL137790.1-201ENST00000634283 177 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SPTA1P02549 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.31□□□□□ -1.88
SPTA1P02549 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AL138885.1-201ENST00000405921 675 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 BX119904.3-201ENST00000428194 957 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 ATP5HP2-201ENST00000433885 485 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.31□□□□□ -1.88
SPTA1P02549 AC010095.1-201ENST00000443543 144 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 RPS17P13-201ENST00000448974 407 ntBASIC3.31□□□□□ -1.88
SPTA1P02549 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms