Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC006042.3-201ENST00000454684 1469 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AL136116.1-201ENST00000403591 381 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 RPS12P5-201ENST00000423449 371 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC009263.1-201ENST00000441193 1239 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AL162388.1-201ENST00000450912 352 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC243772.1-201ENST00000451620 410 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC068587.1-201ENST00000483613 781 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 FTH1P24-201ENST00000503502 462 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC022960.2-201ENST00000616300 666 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 AC022149.2-201ENST00000621061 203 ntBASIC4.14□□□□□ -1.75
CTDNEP1O95476 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTDNEP1O95476 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CTDNEP1O95476 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTDNEP1O95476 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC007685.1-201ENST00000329806 452 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 MIR423-201ENST00000362201 94 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 HSPD1P16-201ENST00000402302 394 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 CYCSP19-201ENST00000411715 316 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AL035423.1-201ENST00000420331 213 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 MTCO1P51-201ENST00000427672 1060 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 HMGB3P5-201ENST00000428894 612 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTDNEP1O95476 ANP32BP2-201ENST00000454525 545 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC091959.2-201ENST00000477363 321 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 IGLVIV-53-201ENST00000520107 367 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTDNEP1O95476 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC234775.3-201ENST00000564612 656 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CTDNEP1O95476 AC112200.1-201ENST00000625015 234 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.13□□□□□ -1.75
CTDNEP1O95476 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
CTDNEP1O95476 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 MIR365B-201ENST00000362317 111 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 RNU6-1331P-201ENST00000363658 106 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 MIR708-201ENST00000390708 88 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 RPL21P17-201ENST00000397467 475 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 RN7SKP159-201ENST00000410657 292 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 RAB9AP3-201ENST00000412737 573 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 RPS20P1-201ENST00000434853 354 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 MTCO3P17-201ENST00000443775 513 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 RAB9AP1-201ENST00000449393 573 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 PPIAP3-201ENST00000450588 505 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 ACTG1P13-201ENST00000486987 1043 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 SETP14-201ENST00000497538 873 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 CDH12P2-201ENST00000504393 298 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 AC025423.2-201ENST00000537570 439 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 U4.6-201ENST00000621618 127 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CTDNEP1O95476 CEP170P1-201ENST00000502249 4587 ntBASIC4.12□□□□□ -1.75
CTDNEP1O95476 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CTDNEP1O95476 HSPA8P1-201ENST00000425843 1833 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms