Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
FOXN3O00409 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 DHX9P1-201ENST00000436565 3076 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXN3O00409 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
FOXN3O00409 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 AC008079.2-201ENST00000623543 20396 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 SNORD113-6-201ENST00000363345 75 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 RNA5SP507-201ENST00000363603 121 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 RNU6-157P-201ENST00000383957 107 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.14□□□□□ -1.59
FOXN3O00409 OR2AM1P-201ENST00000422137 422 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC011233.1-201ENST00000422812 283 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.14□□□□□ -1.59
FOXN3O00409 RPL36P19-201ENST00000430744 301 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AL513175.1-201ENST00000431492 780 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXN3O00409 MTND1P32-201ENST00000433043 938 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 MRPL48P1-201ENST00000445390 636 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 TDGF1P1-201ENST00000445734 527 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXN3O00409 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 RPL5P30-201ENST00000465511 891 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC074386.1-201ENST00000476560 767 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC126121.1-201ENST00000482313 553 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 RPS3AP22-201ENST00000488297 769 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 FTH1P24-201ENST00000503502 462 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 WBP1LP4-201ENST00000505043 344 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 AC117522.2-201ENST00000510049 657 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 KRT19P6-201ENST00000510983 209 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC010587.2-201ENST00000511727 448 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.14□□□□□ -1.59
FOXN3O00409 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 OR5AZ1P-201ENST00000527448 943 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 AC007834.2-201ENST00000536310 343 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXN3O00409 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.14□□□□□ -1.59
FOXN3O00409 AC087465.1-201ENST00000560574 245 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 RN7SL802P-201ENST00000577858 299 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 MIR5699-201ENST00000578903 90 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC022726.1-201ENST00000587475 207 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 RNF138P2-201ENST00000603490 592 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AP000676.3-201ENST00000623299 569 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AL512506.2-201ENST00000624472 458 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 MIR4278-201ENST00000636094 69 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AP003399.1-201ENST00000637534 361 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXN3O00409 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.14□□□□□ -1.59
FOXN3O00409 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 AC107068.1-201ENST00000563286 4218 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.14□□□□□ -1.59
FOXN3O00409 AP000776.1-201ENST00000530032 1663 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
FOXN3O00409 INTS6P1-201ENST00000504674 2530 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.14□□□□□ -1.59
FOXN3O00409 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
FOXN3O00409 AL359922.3-201ENST00000624779 1670 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
FOXN3O00409 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
FOXN3O00409 RNU1-83P-201ENST00000363426 164 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 U3.30-201ENST00000391308 210 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 DSTNP4-201ENST00000399472 474 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 AP000580.1-201ENST00000404439 358 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 SPTLC1P2-201ENST00000407089 121 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 RPL7P57-201ENST00000423238 740 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.13□□□□□ -1.59
FOXN3O00409 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXN3O00409 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
FOXN3O00409 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.13□□□□□ -1.59
FOXN3O00409 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.13□□□□□ -1.59
FOXN3O00409 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.13□□□□□ -1.59
FOXN3O00409 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.13□□□□□ -1.59
FOXN3O00409 PRPF38AP2-201ENST00000438179 851 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 AC105402.2-201ENST00000438503 358 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 CEACAMP7-201ENST00000444105 496 ntBASIC5.13□□□□□ -1.59
FOXN3O00409 Z83846.1-201ENST00000446798 265 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms