Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC005344.1-201ENST00000613391 459 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02471-203ENST00000641941 4752 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL049555.1-201ENST00000562834 1933 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 MAPK10-372ENST00000641954 3413 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 MIR423-201ENST00000362201 94 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 SNORD46.1-201ENST00000364139 104 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 NPM1P10-201ENST00000398310 865 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 GOT2P5-201ENST00000433995 546 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS20P1-201ENST00000434853 354 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 S100A11P1-201ENST00000477525 312 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 RN7SL323P-201ENST00000494712 295 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC010342.1-201ENST00000514047 877 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC090246.1-201ENST00000616499 426 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC004777.1-201ENST00000624317 287 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP004289.2-201ENST00000444413 1457 ntBASIC3.85□□□□□ -1.79
TMX2-CTNND1H3BSU7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 RNU1-18P-201ENST00000363062 164 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 RN7SKP44-201ENST00000363602 316 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 MIR30B-201ENST00000384850 88 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 SNORA11.1-201ENST00000408133 129 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 RN7SKP56-201ENST00000410513 331 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC069157.1-201ENST00000421749 137 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 USP12PY-201ENST00000427677 1064 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL358472.1-201ENST00000431295 329 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC016687.1-201ENST00000482574 353 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS4XP15-201ENST00000489210 795 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPL23AP87-202ENST00000573039 466 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC005972.3-201ENST00000606304 481 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC019176.2-201ENST00000611579 315 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC004825.2-201ENST00000616634 455 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC244100.1-202ENST00000621554 382 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC067852.7-201ENST00000623270 535 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 MTND4P10-201ENST00000446199 1363 ntBASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.84□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP002001.2-201ENST00000529025 1469 ntBASIC3.84□□□□□ -1.8
TMX2-CTNND1H3BSU7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TMX2-CTNND1H3BSU7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TMX2-CTNND1H3BSU7 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 FAM91A3P-201ENST00000456826 2544 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 SNORA71.3-201ENST00000362582 128 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 HMGB3P19-201ENST00000403971 560 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 MIR1251-201ENST00000408552 70 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 RAB9AP3-201ENST00000412737 573 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 IFNNP1-201ENST00000429219 553 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 YME1L1P1-201ENST00000429435 297 ntBASIC3.83□□□□□ -1.8
TMX2-CTNND1H3BSU7 HIGD1AP4-201ENST00000430194 280 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms