Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC024940.4-201ENST00000605507 246 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC078899.5-201ENST00000612475 178 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC009704.2-201ENST00000618739 483 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL359757.1-201ENST00000623176 255 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC00561-201ENST00000565815 2738 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AL022322.2-201ENST00000624072 20397 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 AC104623.2-202ENST00000623477 4002 ntBASIC5.69□□□□□ -1.5
COL4A3BPQ9Y5P4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL672167.1-205ENST00000641112 3080 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL590084.2-201ENST00000401481 382 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL035079.1-201ENST00000405210 287 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SKP16-201ENST00000410180 299 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 OR8G2P-201ENST00000412796 908 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 MTND2P18-201ENST00000419962 1030 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL022400.1-201ENST00000423946 935 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL590762.4-201ENST00000425885 253 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 COX6CP13-201ENST00000428703 226 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 SETD6P1-201ENST00000444575 317 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC091180.1-201ENST00000462104 372 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 RN7SL443P-201ENST00000464331 290 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 HMGN2P25-201ENST00000486956 268 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 NDUFB5P1-201ENST00000508134 564 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 MTND1P22-201ENST00000510572 951 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 MTCYBP37-201ENST00000510642 1133 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 GCSHP4-201ENST00000538792 439 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC008015.1-201ENST00000555505 465 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 ISCA1P3-201ENST00000577104 373 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC018695.5-201ENST00000605872 315 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AP005432.2-201ENST00000608162 586 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC008083.4-201ENST00000615076 444 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AP005435.3-201ENST00000531260 3198 ntBASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL4A3BPQ9Y5P4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 SNORA4.1-201ENST00000364263 144 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 RNA5SP455-201ENST00000365190 119 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 ATP5F1P3-201ENST00000397213 657 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 MIR937-201ENST00000401271 86 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC234781.2-201ENST00000426370 994 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 HMGN2P27-201ENST00000427352 270 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 PSMA2P3-201ENST00000429685 675 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 TCEA1P3-201ENST00000443005 880 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 CYCSP24-201ENST00000445119 316 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC004980.3-201ENST00000447046 365 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL4A3BPQ9Y5P4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms