Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 RN7SL585P-201ENST00000470538 280 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC091167.1-201ENST00000492017 396 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 RPL23AP73-201ENST00000492507 471 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC108145.1-201ENST00000503770 153 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 RNA5SP497-201ENST00000516081 97 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 SNORA76.2-201ENST00000517095 137 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 AP003168.1-201ENST00000530091 307 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC025884.1-201ENST00000556034 378 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 ZNF92P2-201ENST00000600543 1059 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC011374.2-201ENST00000607135 526 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AP001033.2-201ENST00000609701 1003 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AP006248.2-201ENST00000623309 592 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AL359715.5-201ENST00000623431 443 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 AC138907.10-201ENST00000623708 983 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 MIR3653-201ENST00000625572 110 ntBASIC3.99□□□□□ -1.77
RNF6Q9Y252 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNF6Q9Y252 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF6Q9Y252 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 OR5P1P-201ENST00000299512 925 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 RNU1-64P-201ENST00000365443 163 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 RNA5SP366-201ENST00000365454 123 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 AL031736.2-201ENST00000426573 787 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC005189.1-201ENST00000431286 310 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AL353718.1-201ENST00000451028 517 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 RPS27AP17-201ENST00000463344 455 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC053481.1-201ENST00000467217 306 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 RPL23AP71-201ENST00000470966 469 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 TRBV8-2-201ENST00000475637 270 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC090819.1-201ENST00000523800 1111 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC090751.1-201ENST00000566966 267 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 HNRNPCP4-201ENST00000571636 900 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC069304.3-201ENST00000603938 1084 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC008785.1-201ENST00000624475 456 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 AC005261.4-201ENST00000600047 1385 ntBASIC3.98□□□□□ -1.77
RNF6Q9Y252 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF6Q9Y252 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF6Q9Y252 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF6Q9Y252 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 HSPA8P19-201ENST00000505359 1517 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 RNA5SP502-201ENST00000362694 119 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 RNU6-796P-201ENST00000391086 107 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 PNRC2P1-201ENST00000423940 420 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 RNFT1P2-201ENST00000443064 757 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 RPL30P11-201ENST00000495304 339 ntBASIC3.97□□□□□ -1.77
RNF6Q9Y252 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF6Q9Y252 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms