Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 RNA5SP120-201ENST00000410900 112 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 RNU6-579P-201ENST00000516879 102 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AC092747.2-201ENST00000545069 983 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 EIF1P6-201ENST00000600054 334 ntBASIC4.6□□□□□ -1.67
SCN11AQ9UI33 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCN11AQ9UI33 AP000542.2-201ENST00000623199 6179 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC097713.2-201ENST00000430199 356 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC092447.2-201ENST00000435487 669 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 HMGB3P22-202ENST00000451823 572 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AP000942.1-201ENST00000463969 747 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC010342.1-201ENST00000514047 877 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC005476.1-201ENST00000554427 397 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 OR6C71P-202ENST00000641886 1107 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 AC083843.3-201ENST00000623679 2186 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 NAMPTP1-201ENST00000440465 2514 ntBASIC4.59□□□□□ -1.67
SCN11AQ9UI33 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.59□□□□□ -1.67
SCN11AQ9UI33 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.59□□□□□ -1.68
SCN11AQ9UI33 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AL031121.1-201ENST00000406553 254 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 RN7SKP111-201ENST00000410349 271 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC079880.2-201ENST00000603790 1213 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AP003392.5-201ENST00000607857 415 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC022149.2-201ENST00000621061 203 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AP003355.3-201ENST00000623465 114 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC090337.1-201ENST00000579651 2074 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 GNG5P1-201ENST00000255500 204 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 MTHFD2P2-201ENST00000407725 247 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 MTND6P5-201ENST00000448266 512 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC099563.1-201ENST00000456086 418 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC017015.1-201ENST00000477387 286 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC027281.1-201ENST00000574178 758 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AL163642.2-201ENST00000604722 1019 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 AC116312.1-201ENST00000606841 314 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.58□□□□□ -1.68
SCN11AQ9UI33 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 EIF4A1P11-201ENST00000451239 222 ntBASIC4.57□□□□□ -1.68
SCN11AQ9UI33 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 RPL21P13-201ENST00000488305 481 ntBASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AGGF1P3-201ENST00000493675 1213 ntBASIC4.57□□□□□ -1.68
SCN11AQ9UI33 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 RNU2-27P-201ENST00000516185 142 ntBASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AL732618.1-201ENST00000623251 301 ntBASIC4.57□□□□□ -1.68
SCN11AQ9UI33 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SCN11AQ9UI33 AC020633.1-201ENST00000468439 2247 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 BTBD10P1-201ENST00000549824 1352 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms