Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC012468.1-201ENST00000604888 430 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC107021.2-201ENST00000567714 2095 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC093775.1-201ENST00000624154 1868 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 RNA5SP119-201ENST00000362715 117 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 RNU6-525P-201ENST00000363685 104 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 SNORA57.3-201ENST00000411095 141 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 HMGB3P9-201ENST00000441799 583 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 RN7SKP209-201ENST00000516888 304 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 EIF1P6-201ENST00000600054 334 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 AC124856.1-201ENST00000600819 896 ntBASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPC1L1Q9UHC9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
NPC1L1Q9UHC9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NPC1L1Q9UHC9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
NPC1L1Q9UHC9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.09□□□□□ -1.6
NPC1L1Q9UHC9 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 HMGN2P8-201ENST00000391458 268 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 IFNNP1-201ENST00000429219 553 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 HMGB3P10-201ENST00000434734 572 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AL591363.1-201ENST00000450091 483 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 RPL7P49-201ENST00000471402 708 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 SYT14P1-201ENST00000481459 721 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 TRBV12-2-201ENST00000489763 344 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 DSTNP2-201ENST00000504533 515 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 ATG10-AS1-201ENST00000504846 648 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AL133457.1-201ENST00000564251 987 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 BNIP3P7-201ENST00000605641 516 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC103858.2-201ENST00000621471 543 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AP000553.6-201ENST00000641242 118 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC027290.2-201ENST00000623210 18662 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 AC087190.4-201ENST00000574616 8334 ntBASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NPC1L1Q9UHC9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 MIR7-3-201ENST00000384898 110 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 ATP5A1P2-201ENST00000412323 255 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 ACTR3P3-201ENST00000480448 893 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 RANP9-201ENST00000519957 271 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC027281.1-201ENST00000574178 758 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC096553.1-201ENST00000605169 829 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 AC012020.1-201ENST00000624541 1728 ntBASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NPC1L1Q9UHC9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 AC017007.4-201ENST00000503353 1352 ntBASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.06□□□□□ -1.6
NPC1L1Q9UHC9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms