Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AP000563.1-201ENST00000490865 758 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 RNU6-1129P-201ENST00000515964 104 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 OR4A45P-201ENST00000529954 901 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC011840.5-201ENST00000582125 771 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AL031281.1-201ENST00000604049 488 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC115621.1-201ENST00000604653 858 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AL139344.1-201ENST00000605228 195 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 MIR6133-201ENST00000617057 108 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC091905.4-201ENST00000623432 202 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC092184.1-201ENST00000625042 715 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 MIR4496-201ENST00000635896 61 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 MTND2P41-201ENST00000637599 773 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AL596275.2-204ENST00000641628 552 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AL596275.2-206ENST00000641957 626 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC130650.2-201ENST00000618736 2403 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.75□□□□□ -1.65
LRFN1Q9P244 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRFN1Q9P244 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.75□□□□□ -1.65
LRFN1Q9P244 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 DDX18P5-201ENST00000534547 1306 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 OR9G4-201ENST00000302957 984 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 RNU6-931P-201ENST00000363850 107 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 SNORA70.6-201ENST00000383934 134 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 SNORA51.6-201ENST00000384151 125 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 RNY3P9-201ENST00000384727 106 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 GJA6P-201ENST00000415117 1042 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 MTND5P25-201ENST00000430499 799 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 HIGD1AP8-201ENST00000453927 274 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 GYG1P1-201ENST00000460864 698 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC093534.1-201ENST00000504977 132 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 AP001636.2-201ENST00000525517 696 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AP000926.4-201ENST00000527351 454 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 MIR4458-201ENST00000578872 75 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 MIR4480-201ENST00000582492 71 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AL353778.1-201ENST00000603149 408 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC103881.1-201ENST00000603476 538 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC007566.2-201ENST00000603642 413 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC010680.4-201ENST00000605334 543 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC112220.3-201ENST00000605502 502 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC105429.2-201ENST00000610567 517 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC078899.5-201ENST00000612475 178 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC008083.4-201ENST00000615076 444 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC092650.2-201ENST00000619984 902 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC131159.1-201ENST00000621854 213 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC067852.7-201ENST00000623270 535 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AP006248.2-201ENST00000623309 592 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 LINC00561-201ENST00000565815 2738 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.74□□□□□ -1.65
LRFN1Q9P244 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
LRFN1Q9P244 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRFN1Q9P244 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms