Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC28BQ9BUN5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 OR56B2P-202ENST00000641377 2453 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RNU6-796P-201ENST00000391086 107 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 MTCO1P43-201ENST00000431831 488 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AL645931.1-201ENST00000439737 410 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RPS3AP53-201ENST00000454716 778 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RPL36AP13-201ENST00000457490 317 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 PPIAP21-201ENST00000464473 501 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC021205.1-201ENST00000468797 348 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RPL21P126-201ENST00000470049 478 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AP000926.1-201ENST00000479573 241 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RPL21P47-201ENST00000483696 477 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC107398.1-201ENST00000486904 505 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 CDH12P2-201ENST00000504393 298 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 OR7H2P-201ENST00000513483 306 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 RNU6-1308P-201ENST00000516817 103 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 OR8X1P-201ENST00000534542 869 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AL133457.1-201ENST00000564251 987 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC010680.3-201ENST00000604215 520 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC012557.1-201ENST00000607115 611 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AL356274.1-201ENST00000617064 410 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC007275.1-201ENST00000621243 671 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC140479.6-201ENST00000633535 357 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 AC053481.2-202ENST00000582394 1500 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 EXOC5P1-201ENST00000510543 1969 ntBASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC28BQ9BUN5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.03□□□□□ -1.77
CCDC28BQ9BUN5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC109780.1-201ENST00000451768 1344 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC025031.4-201ENST00000621248 3271 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 RNU6-354P-201ENST00000383862 107 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 RNA5SP87-201ENST00000384155 118 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 RNU6-610P-201ENST00000384264 107 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AL583835.1-201ENST00000399570 407 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 HMGB3P19-201ENST00000403971 560 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 RSL24D1P1-201ENST00000404972 493 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 PNRC2P1-201ENST00000423940 420 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC013262.1-201ENST00000426710 252 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC096638.2-201ENST00000434965 711 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC092013.1-201ENST00000438795 332 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC073648.4-201ENST00000442655 781 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 CYCSP42-201ENST00000450823 238 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 HMGB3P21-201ENST00000452483 547 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 RPS3AP41-201ENST00000462701 778 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 OR5H3P-201ENST00000502817 919 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 HPRT1P2-201ENST00000505250 544 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 GNRHR2P1-201ENST00000555315 631 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 BNIP3P40-201ENST00000596017 556 ntBASIC4.02□□□□□ -1.77
CCDC28BQ9BUN5 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms