Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCA3Q99758 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCA3Q99758 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
ABCA3Q99758 NACAP7-201ENST00000407371 609 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 RNA5SP80-201ENST00000410475 111 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.72□□□□□ -1.65
ABCA3Q99758 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ABCA3Q99758 AP001992.1-205ENST00000462248 379 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 BTG4P1-201ENST00000510421 183 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.72□□□□□ -1.65
ABCA3Q99758 AL162274.2-201ENST00000614406 332 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 AL359757.2-201ENST00000624309 274 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 IPO8P1-201ENST00000455509 3109 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
ABCA3Q99758 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCA3Q99758 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCA3Q99758 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 RNU1-140P-201ENST00000365040 165 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCA3Q99758 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.72□□□□□ -1.65
ABCA3Q99758 HSPE1P16-201ENST00000426640 348 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCA3Q99758 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCA3Q99758 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCA3Q99758 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.72□□□□□ -1.65
ABCA3Q99758 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ABCA3Q99758 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ABCA3Q99758 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCA3Q99758 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCA3Q99758 AC093849.1-201ENST00000563631 2209 ntBASIC4.71□□□□□ -1.66
ABCA3Q99758 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ABCA3Q99758 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCA3Q99758 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCA3Q99758 TAF9BP1-201ENST00000396646 746 ntBASIC4.71□□□□□ -1.66
ABCA3Q99758 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCA3Q99758 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.71□□□□□ -1.66
ABCA3Q99758 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCA3Q99758 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCA3Q99758 U3.44-201ENST00000458938 192 ntBASIC4.71□□□□□ -1.66
ABCA3Q99758 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.71□□□□□ -1.66
ABCA3Q99758 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCA3Q99758 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.71□□□□□ -1.66
ABCA3Q99758 CYP4A43P-201ENST00000568156 121 ntBASIC4.71□□□□□ -1.66
ABCA3Q99758 AC073657.2-201ENST00000605661 303 ntBASIC4.71□□□□□ -1.66
ABCA3Q99758 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.71□□□□□ -1.66
ABCA3Q99758 AP003355.3-201ENST00000623465 114 ntBASIC4.71□□□□□ -1.66
ABCA3Q99758 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ABCA3Q99758 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
ABCA3Q99758 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ABCA3Q99758 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ABCA3Q99758 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ABCA3Q99758 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ABCA3Q99758 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ABCA3Q99758 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 RNU1-18P-201ENST00000363062 164 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCA3Q99758 AL136131.1-201ENST00000406079 803 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 U3.39-201ENST00000408569 239 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 AC069285.2-201ENST00000440210 275 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 TPTE2P3-201ENST00000441562 1189 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 RPS4XP2-201ENST00000458402 793 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 RPL7P38-201ENST00000488396 739 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.7□□□□□ -1.66
ABCA3Q99758 OOSP1P2-201ENST00000579644 351 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 LARP7P3-201ENST00000579888 337 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 AC006363.1-201ENST00000603806 463 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 AC006023.1-201ENST00000603944 259 ntBASIC4.7□□□□□ -1.66
ABCA3Q99758 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.7□□□□□ -1.66
ABCA3Q99758 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ABCA3Q99758 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ABCA3Q99758 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ABCA3Q99758 SNORA44-201ENST00000384584 132 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 RN7SKP97-201ENST00000410966 333 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 AC008065.1-201ENST00000428525 348 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 NDUFB1P1-201ENST00000435191 180 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 S100A11P2-201ENST00000467589 312 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 RPL27AP5-201ENST00000469428 449 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 HMGB1P21-201ENST00000502313 581 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 FCF1P8-201ENST00000510322 597 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 PPBPP1-201ENST00000510807 373 ntBASIC4.69□□□□□ -1.66
ABCA3Q99758 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.69□□□□□ -1.66
ABCA3Q99758 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ABCA3Q99758 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCA3Q99758 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.69□□□□□ -1.66
ABCA3Q99758 MTND6P33-201ENST00000571794 183 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms