Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RNU6-289P-201ENST00000364093 107 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 Y_RNA.263-201ENST00000364659 114 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 Y_RNA.535-201ENST00000384612 99 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RN7SKP29-201ENST00000410957 272 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC048351.1-201ENST00000420064 602 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 SDCBPP2-201ENST00000424643 885 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RPS3AP38-201ENST00000435889 763 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RPL23AP16-201ENST00000441715 421 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AL035551.1-201ENST00000446931 348 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RPL23AP15-201ENST00000450202 459 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RNU7-136P-201ENST00000458819 69 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RBM43P1-201ENST00000476891 1081 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RPS29P25-201ENST00000481709 171 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RPL38P3-201ENST00000484463 213 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 FAM172BP-201ENST00000487497 1089 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC007182.2-201ENST00000489251 402 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MTCO2P30-201ENST00000503662 364 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 NENFP3-201ENST00000503735 313 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AF235103.2-201ENST00000525753 346 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 OR5AL2P-201ENST00000532185 920 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC079600.1-201ENST00000550326 297 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC091078.2-201ENST00000557145 559 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AL138976.2-201ENST00000563989 694 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MIR5186-201ENST00000577504 120 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MIR4637-201ENST00000582405 84 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 HMGN1P30-201ENST00000589286 268 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC044792.1-201ENST00000593294 196 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC245014.2-201ENST00000603689 287 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC246785.4-201ENST00000605374 287 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC074140.1-201ENST00000621617 208 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MIR3662-201ENST00000637030 95 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 TCP11X1-202ENST00000622971 1372 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 AC232271.1-201ENST00000602455 2715 ntBASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.5□□□□□ -1.53
PTCHD1Q96NR3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AL161756.3-201ENST00000641216 2071 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AL356776.1-201ENST00000406574 447 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 RPS3AP2-201ENST00000407190 754 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AMD1P2-201ENST00000412936 992 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 MRPL53P1-201ENST00000414323 319 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 HMGB3P20-201ENST00000417997 600 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AC092651.1-201ENST00000426110 312 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 AL445669.1-201ENST00000426743 755 ntBASIC5.49□□□□□ -1.53
PTCHD1Q96NR3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms