Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RNU6-839P-201ENST00000363347 108 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 RNU6-1283P-201ENST00000365314 105 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 SNORA56-201ENST00000383966 129 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 SNORA51.8-201ENST00000384234 132 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 U3.28-201ENST00000391249 210 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL109941.1-201ENST00000401925 229 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 CYCSP45-201ENST00000402289 315 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC068533.2-201ENST00000411872 306 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 RPL23AP39-201ENST00000415533 405 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 EI24P4-201ENST00000423683 1078 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 CYCSP11-201ENST00000436426 315 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 MTND2P20-201ENST00000440805 661 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 RPL36AP33-201ENST00000450395 310 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL672138.1-201ENST00000450604 1015 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 SNRPGP9-201ENST00000456025 225 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC116337.2-201ENST00000477662 156 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 RPL9P33-201ENST00000484311 566 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC023424.1-201ENST00000496058 459 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 RPS17P5-201ENST00000498293 408 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC096751.1-202ENST00000502691 1067 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 SNRPCP2-201ENST00000504370 475 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC006499.5-201ENST00000505037 514 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 RNU6-513P-201ENST00000516104 104 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 IGKV2D-10-201ENST00000520194 281 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 CCNG2P1-201ENST00000549521 1000 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 POLR2KP1-201ENST00000553226 168 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 GTF2IP8-201ENST00000560687 584 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AGGF1P8-201ENST00000562979 1000 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 BPTFP1-201ENST00000579209 492 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 MTND1P15-201ENST00000579262 949 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 MIR4646-201ENST00000580775 63 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC011840.5-201ENST00000582125 771 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL390838.2-201ENST00000602394 274 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC093765.1-201ENST00000603758 881 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 MTCYBP22-201ENST00000603788 447 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC009027.1-201ENST00000604510 479 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AP003973.1-201ENST00000604639 691 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 FAM25E-202ENST00000608562 189 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC008498.1-201ENST00000613012 531 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AL353726.1-201ENST00000614041 1000 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC025588.4-201ENST00000615802 908 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 U6atac.1-201ENST00000616025 117 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AP002799.1-201ENST00000623552 423 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF31Q96EP0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 AC011447.7-201ENST00000624228 1590 ntBASIC5.03□□□□□ -1.6
RNF31Q96EP0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF31Q96EP0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF31Q96EP0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF31Q96EP0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF31Q96EP0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.02□□□□□ -1.61
RNF31Q96EP0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RNF31Q96EP0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF31Q96EP0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RNF31Q96EP0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF31Q96EP0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms