Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC093673.2-201ENST00000609674 331 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AP000255.1-201ENST00000610276 676 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AL121612.2-201ENST00000612261 482 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC109454.4-201ENST00000623411 649 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AP002799.1-201ENST00000623552 423 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC124312.6-202ENST00000623624 418 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 AC011266.1-201ENST00000624119 3569 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS33AQ96AX1 DBF4P1-201ENST00000412976 1892 ntBASIC4.35□□□□□ -1.71
VPS33AQ96AX1 NXPH1-205ENST00000602349 1953 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 RNU1-44P-201ENST00000384453 163 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 MIR93-201ENST00000385024 80 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AL603865.2-201ENST00000401679 213 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 FCF1P5-201ENST00000406490 482 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 UBTFL3-201ENST00000418934 1024 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC140479.3-201ENST00000418944 1126 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC004074.1-201ENST00000421810 1063 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 PSMA2P3-201ENST00000429685 675 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 PPIAP20-201ENST00000449839 135 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC244505.3-201ENST00000454598 187 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 S100A11P1-201ENST00000477525 312 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 UBTFL6-201ENST00000477929 1024 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 GAPDHP39-201ENST00000481866 979 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 RPSAP50-201ENST00000481955 852 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC004815.1-201ENST00000484185 331 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC012170.1-201ENST00000495139 359 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC008837.1-201ENST00000511513 412 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 OR8I1P-201ENST00000529291 931 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 BNIP3P27-201ENST00000599991 412 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC068790.5-201ENST00000602741 355 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC083899.3-201ENST00000603413 594 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AL390816.3-201ENST00000604527 1066 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC018754.1-201ENST00000607486 925 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AL133445.2-201ENST00000611191 527 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 AC111188.2-201ENST00000529697 1387 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 MTCO1P11-201ENST00000429111 1528 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.34□□□□□ -1.71
VPS33AQ96AX1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS33AQ96AX1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
VPS33AQ96AX1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS33AQ96AX1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.34□□□□□ -1.72
VPS33AQ96AX1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
VPS33AQ96AX1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
VPS33AQ96AX1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
VPS33AQ96AX1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MTCO1P24-201ENST00000515438 1558 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MTND5P31-201ENST00000419366 1374 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC067945.1-201ENST00000342609 618 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 RNA5SP305-201ENST00000362665 119 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MCTS2P-201ENST00000394552 546 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 GSTA8P-201ENST00000404253 637 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MTCO3P31-201ENST00000405526 789 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 ZNF603P-201ENST00000405613 487 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL355143.1-201ENST00000407101 841 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 USP9YP21-201ENST00000420603 432 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 SKP1P3-201ENST00000429280 487 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 B3GNT2P1-201ENST00000434960 952 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 RPL7P59-201ENST00000447700 943 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 OR1H1P-201ENST00000448731 937 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 GAPDHP36-201ENST00000480688 918 ntBASIC4.33□□□□□ -1.72
VPS33AQ96AX1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS33AQ96AX1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms