Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.84□□□□□ -1.63
CPEB3Q8NE35 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CPEB3Q8NE35 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.84□□□□□ -1.63
CPEB3Q8NE35 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CPEB3Q8NE35 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CPEB3Q8NE35 AL355488.2-201ENST00000609909 2850 ntBASIC4.84□□□□□ -1.63
CPEB3Q8NE35 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CPEB3Q8NE35 AC006206.1-201ENST00000544842 3387 ntBASIC4.84□□□□□ -1.64
CPEB3Q8NE35 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.84□□□□□ -1.64
CPEB3Q8NE35 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
CPEB3Q8NE35 DBF4P1-201ENST00000412976 1892 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 ZNF37BP-203ENST00000452306 1352 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OR5BR1P-201ENST00000524992 1330 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RNU6-797P-201ENST00000363101 109 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 SNORD115-47-201ENST00000391226 86 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 HMGB3P7-201ENST00000400214 611 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 USP9YP6-201ENST00000413550 854 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OFD1P18Y-201ENST00000420889 959 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RIMKLBP2-201ENST00000424737 654 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OR6D1P-201ENST00000436165 939 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RPL5P25-201ENST00000441148 775 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC244505.5-201ENST00000443639 207 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AP000281.1-201ENST00000444036 316 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 LINC02210-201ENST00000444561 288 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 USP9YP34-201ENST00000453983 808 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AZGP1P2-201ENST00000454506 345 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RN7SL583P-201ENST00000475692 287 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RN7SL717P-201ENST00000478343 297 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RN7SL273P-201ENST00000481561 299 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 HMGB1P36-201ENST00000487709 576 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AL136038.1-201ENST00000497246 351 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC108941.1-201ENST00000502853 530 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 FAM92A1P2-202ENST00000504766 877 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC091133.4-201ENST00000511142 308 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 IGKV3D-34-201ENST00000522638 302 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AP002748.2-201ENST00000528671 348 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 OR4A45P-201ENST00000529954 901 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC027544.3-201ENST00000535082 757 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AL356055.1-201ENST00000602528 446 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC091304.9-201ENST00000612091 226 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RNA5SP440-201ENST00000612665 119 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC243756.2-201ENST00000618406 463 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AP003400.5-201ENST00000624827 617 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 AC005618.4-201ENST00000625053 554 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 ATE1-AS1-202ENST00000636460 506 ntBASIC4.83□□□□□ -1.64
CPEB3Q8NE35 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPEB3Q8NE35 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPEB3Q8NE35 CYP1D1P-201ENST00000416662 1433 ntBASIC4.82□□□□□ -1.64
CPEB3Q8NE35 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms