Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 HMGN2P6-201ENST00000551091 273 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC090751.1-201ENST00000566966 267 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC007687.1-201ENST00000602704 304 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC093765.1-201ENST00000603758 881 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL031320.1-201ENST00000604177 357 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL133445.2-201ENST00000611191 527 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL359715.5-201ENST00000623431 443 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AP005264.7-201ENST00000625003 745 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC138649.5-201ENST00000637456 137 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 ERCC6-202ENST00000374127 1782 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 BDP1P-201ENST00000582658 1990 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 HSPA8P19-201ENST00000505359 1517 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 FAM3C2-201ENST00000312214 681 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RNU6-543P-201ENST00000362576 108 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 SNORA63.3-201ENST00000362682 132 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RNA5SP27-201ENST00000363839 119 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RNU6-481P-201ENST00000384194 107 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC087650.1-201ENST00000431445 468 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AL138799.3-201ENST00000438968 350 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC053481.1-201ENST00000467217 306 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AL161747.1-201ENST00000480068 358 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC092451.1-201ENST00000480211 153 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC092902.1-201ENST00000486999 259 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC011005.3-201ENST00000491624 395 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC104629.1-201ENST00000494226 508 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RN7SL101P-201ENST00000496350 279 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 HMGN1P15-201ENST00000513870 295 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 IGKV2-38-201ENST00000517443 247 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC139103.1-201ENST00000534696 1030 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AP001160.4-201ENST00000596971 382 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 MIR6862-1-201ENST00000613016 70 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 MIR8084-201ENST00000614105 89 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 MIR6862-2-201ENST00000614755 70 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC007546.1-201ENST00000619452 559 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AP005019.3-201ENST00000620418 560 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC106858.1-201ENST00000637497 429 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AC083899.2-201ENST00000423285 1376 ntBASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC71LQ8N9Z2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 DCAF13P1-201ENST00000495256 1330 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 MIR659-201ENST00000384963 97 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 PRELID3BP11-201ENST00000414230 479 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 GTF3AP1-201ENST00000416942 1004 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 BMS1P19-201ENST00000433925 393 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC096638.2-201ENST00000434965 711 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AL356535.1-201ENST00000440335 398 ntBASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC71LQ8N9Z2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms