Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 RN7SKP121-201ENST00000410842 305 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RPL21P50-201ENST00000417698 477 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RPS27AP6-201ENST00000427962 448 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 PPIAP10-201ENST00000438675 458 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC073909.1-201ENST00000447112 999 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 HMGB1P7-201ENST00000450921 612 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 FRG2FP-204ENST00000453982 852 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RPL37P3-201ENST00000456825 293 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RPL7AP52-201ENST00000458096 790 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RPL38P1-201ENST00000460914 211 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RN7SL39P-201ENST00000462264 297 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RN7SL643P-201ENST00000471845 291 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 FAM172BP-201ENST00000487497 1089 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RPL23AP40-201ENST00000487630 390 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AP002453.1-201ENST00000492327 668 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RNF138P1-201ENST00000502765 546 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC097173.1-201ENST00000505862 819 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC116917.1-201ENST00000520558 305 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL512360.1-201ENST00000555346 234 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL845552.1-201ENST00000556820 323 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 MIR5186-201ENST00000577504 120 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 MIR4660-201ENST00000583549 74 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC017100.2-201ENST00000584628 355 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 NRBF2P1-201ENST00000587407 859 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 TPMTP1-201ENST00000592307 737 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL359999.1-201ENST00000604513 294 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AL451049.1-201ENST00000608672 497 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AP003122.6-201ENST00000623831 495 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 CASC19-204ENST00000641001 2055 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC133552.1-201ENST00000569988 4007 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RNU6-1085P-201ENST00000363576 107 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 XGY1-201ENST00000381172 446 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 Y_RNA.409-201ENST00000383990 98 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RN7SKP266-201ENST00000410232 287 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RNU6-195P-201ENST00000411352 109 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 ISCA1P6-201ENST00000427740 390 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 PCNPP2-201ENST00000441651 455 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AL645936.1-201ENST00000441979 518 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 MED28P3-201ENST00000444288 531 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC079448.1-201ENST00000449377 373 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RPL23AP60-201ENST00000450011 454 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RPL23AP15-201ENST00000450202 459 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 HMGB1P4-201ENST00000455362 567 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 BX322784.1-201ENST00000455793 1077 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 BTF3P5-201ENST00000457252 467 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 MTCO1P42-201ENST00000457379 726 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 AC023598.1-201ENST00000472521 361 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RPL12P31-201ENST00000478433 450 ntBASIC5.16□□□□□ -1.58
DTX3Q8N9I9 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DTX3Q8N9I9 RPSAP51-201ENST00000497462 645 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms