Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 MIR3667-201ENST00000581025 74 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 AC234771.5-201ENST00000600161 514 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 AC093765.1-201ENST00000603758 881 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 DPRXP5-201ENST00000604662 539 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 AC018695.5-201ENST00000605872 315 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 AC091304.6-201ENST00000619761 202 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 MIR4278-201ENST00000636094 69 ntBASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC33Q8N5R6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AL031119.1-201ENST00000404707 1879 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 SAMMSON-226ENST00000642089 1582 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RNU6-1066P-201ENST00000363573 105 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RNY3P9-201ENST00000384727 106 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 FABP12P1-201ENST00000401911 322 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 HNRNPDP2-201ENST00000406475 478 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AL133264.1-201ENST00000407157 562 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RAB28P1-201ENST00000411517 641 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 QRSL1P2-201ENST00000418582 964 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC233981.1-201ENST00000423224 461 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 IPMKP1-201ENST00000425988 855 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RPL7P11-201ENST00000437586 658 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC004980.3-201ENST00000447046 365 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 EIF4A1P11-201ENST00000451239 222 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AL356981.1-201ENST00000454879 684 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RN7SL354P-201ENST00000469282 294 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 RN7SL346P-201ENST00000491561 294 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 FTH1P24-201ENST00000503502 462 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 WBP1LP4-201ENST00000505043 344 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC116353.3-201ENST00000511215 249 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 NDUFB4P12-201ENST00000513465 390 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC005868.1-201ENST00000536421 331 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AP006289.1-201ENST00000538089 277 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 GTF2IP8-201ENST00000560687 584 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AL353778.1-201ENST00000603149 408 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC009318.3-201ENST00000616916 503 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC022106.2-201ENST00000620114 757 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC022079.1-201ENST00000621546 602 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC073348.1-201ENST00000623002 331 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC015871.5-202ENST00000623252 701 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AL512506.2-201ENST00000624472 458 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 MIR7641-1-201ENST00000627518 61 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 AC090971.4-201ENST00000560291 1800 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 DDX18P3-201ENST00000404856 2007 ntBASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC33Q8N5R6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 AP000776.1-201ENST00000530032 1663 ntBASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
CCDC33Q8N5R6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms