Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.84□□□□□ -1.96
VPS13CQ709C8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS13CQ709C8 AC005008.1-201ENST00000456151 612 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 MIR4319-201ENST00000577285 85 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 MIR4276-201ENST00000584832 70 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 MIR8069-1-201ENST00000616627 86 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 MIR8069-2-201ENST00000621412 86 ntBASIC2.84□□□□□ -1.96
VPS13CQ709C8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS13CQ709C8 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13CQ709C8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VPS13CQ709C8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS13CQ709C8 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 SRP72P2-201ENST00000344851 1979 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 NACAP7-201ENST00000407371 609 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 OR1AA1P-201ENST00000419597 916 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC006480.1-201ENST00000449887 378 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 STMN1P2-201ENST00000508435 439 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC093815.1-201ENST00000508637 280 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC091826.1-201ENST00000514065 313 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC026979.4-201ENST00000606555 645 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 LINC00561-201ENST00000565815 2738 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 RNA5SP197-201ENST00000363357 119 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 RSL24D1P1-201ENST00000404972 493 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 OR5AW1P-201ENST00000426334 1006 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC135001.1-201ENST00000544546 283 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AL157394.1-201ENST00000562983 1224 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 TNPO1P3-201ENST00000436471 2662 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 RNU6-304P-201ENST00000364855 107 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 RPS20P1-201ENST00000434853 354 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 CCDC75P1-201ENST00000469247 791 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 Y_RNA.676-201ENST00000516393 96 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AL121594.4-201ENST00000556211 1196 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AL157762.1-201ENST00000619612 415 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AC139713.2-210ENST00000641741 992 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13CQ709C8 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13CQ709C8 AP006437.1-201ENST00000641440 3685 ntBASIC2.83□□□□□ -1.96
VPS13CQ709C8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 OR2AS2P-201ENST00000606902 342 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 A2MP1-204ENST00000566278 4130 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC058791.1-201ENST00000608412 3198 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 FTLP6-201ENST00000355274 422 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 MOB1AP1-201ENST00000430903 535 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC105272.1-201ENST00000438604 198 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL590240.3-201ENST00000621416 943 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL773545.4-201ENST00000637262 310 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL513478.4-201ENST00000641636 310 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL645568.2-201ENST00000432815 1337 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 RN7SKP111-201ENST00000410349 271 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms