Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RPS27AP13-201ENST00000498403 237 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AL139174.1-201ENST00000531489 886 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC063949.1-201ENST00000552900 865 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 MIR4715-201ENST00000584117 79 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AL137849.1-201ENST00000604767 169 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 MIR8059-201ENST00000620427 81 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC010608.2-201ENST00000624830 470 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 OR5BE1P-202ENST00000641168 1176 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AL592494.2-201ENST00000425455 1548 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 DCAF13P1-201ENST00000495256 1330 ntBASIC3.43□□□□□ -1.86
CCDC58Q4VC31 AC007496.3-201ENST00000624987 3443 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC025125.1-201ENST00000624743 1922 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 MIR199A2-201ENST00000385289 110 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 MIR92A2-201ENST00000385299 75 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AL133270.1-201ENST00000402635 279 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AL391417.1-201ENST00000404100 426 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 TPT1P2-201ENST00000413105 503 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 VN1R31P-201ENST00000417498 730 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 RPS27AP7-201ENST00000422792 455 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 RPL30P3-201ENST00000424262 333 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 RANP8-201ENST00000444720 713 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 SLC31A1P1-201ENST00000451221 567 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC005229.2-201ENST00000456995 399 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC084198.1-201ENST00000477747 402 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 TRBV12-2-201ENST00000489763 344 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AL132838.2-201ENST00000492041 314 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 NDUFA5P12-201ENST00000503796 343 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC108475.1-201ENST00000507880 950 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 PCBP2P3-201ENST00000509726 843 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC010265.1-201ENST00000513509 211 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC087369.1-201ENST00000520775 996 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 OR4A12P-201ENST00000530847 918 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AP004242.1-201ENST00000533701 349 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 MIR6868-201ENST00000611215 58 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AP003400.2-201ENST00000624036 666 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC011944.2-201ENST00000624440 683 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC048347.1-201ENST00000624621 427 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AL079305.1-201ENST00000623159 3008 ntBASIC3.42□□□□□ -1.86
CCDC58Q4VC31 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC58Q4VC31 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 LARP1BP1-201ENST00000506036 1359 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 MIR383-201ENST00000362257 73 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC016397.1-201ENST00000412463 242 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC006455.6-201ENST00000426192 893 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 HIGD1AP12-201ENST00000427832 281 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 CBX1P1-201ENST00000440184 427 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 RPS7P5-201ENST00000441482 581 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 EIF2S2P2-201ENST00000447161 982 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 PTGES3P5-201ENST00000455109 434 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 RPL7AP52-201ENST00000458096 790 ntBASIC3.41□□□□□ -1.86
CCDC58Q4VC31 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC58Q4VC31 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms