Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN1BQ07699 UBTFL3-201ENST00000418934 1024 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC093162.1-201ENST00000419682 124 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 RPL7P57-201ENST00000423238 740 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC073335.1-201ENST00000427776 363 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 OR2B7P-201ENST00000429302 934 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 B3GNT2P1-201ENST00000434960 952 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 CNOT7P2-201ENST00000441051 832 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 HMGN2P21-201ENST00000447764 270 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC016724.1-201ENST00000453215 421 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN1BQ07699 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 COPS8P2-201ENST00000473228 627 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN1BQ07699 UBTFL6-201ENST00000477929 1024 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC090013.1-201ENST00000485147 480 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 IGKV2D-36-201ENST00000518643 226 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 MORF4L1P3-201ENST00000525966 950 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 OR5M7P-201ENST00000526140 972 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN1BQ07699 OR8I1P-201ENST00000529291 931 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 MTND5P21-201ENST00000531961 522 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 HAUS8P1-201ENST00000549005 542 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AL049839.1-201ENST00000556151 657 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 MIR4691-201ENST00000583764 85 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC011447.4-201ENST00000587562 111 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC068790.5-201ENST00000602741 355 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 SUMO2P15-201ENST00000604285 278 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AL121612.2-201ENST00000612261 482 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AL138721.1-201ENST00000616756 179 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AL109620.1-201ENST00000618738 1197 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 C2orf27A-204ENST00000623058 969 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC012020.1-201ENST00000624541 1728 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SCN1BQ07699 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC005261.4-201ENST00000600047 1385 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN1BQ07699 AC099654.2-201ENST00000433031 1980 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 AC053481.2-202ENST00000582394 1500 ntBASIC4.11□□□□□ -1.75
SCN1BQ07699 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC018529.3-201ENST00000624212 2254 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC016588.2-201ENST00000632484 3021 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN1BQ07699 SNORD116-23-201ENST00000384645 92 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RNU6-1176P-201ENST00000390955 107 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RNU6-1000P-201ENST00000391066 106 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AL121978.1-201ENST00000402778 359 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 MIR1250-201ENST00000408098 113 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RNA5SP39-201ENST00000411245 120 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.1□□□□□ -1.75
SCN1BQ07699 FAR2P4-202ENST00000425399 584 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RPL21P43-201ENST00000425440 472 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RPL21P91-201ENST00000429231 479 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RHOT1P3-201ENST00000436571 331 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RNF2P1-201ENST00000442955 1010 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN1BQ07699 HMGB3P30-201ENST00000457863 606 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RPS26P39-201ENST00000469206 341 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 RN7SL97P-201ENST00000486780 299 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC140172.1-201ENST00000502928 141 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 RN7SKP147-201ENST00000517154 244 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC090281.1-201ENST00000523019 276 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN1BQ07699 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 SNORD39.3-201ENST00000584451 71 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC091178.1-203ENST00000584586 279 ntBASIC4.1□□□□□ -1.75
SCN1BQ07699 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.1□□□□□ -1.75
SCN1BQ07699 AL583856.2-201ENST00000606298 543 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms