Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC233279.1-201ENST00000455300 423 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 NF1P3-201ENST00000457709 450 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 RNU6-420P-201ENST00000458780 107 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 RN7SL184P-201ENST00000488308 297 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 AL035404.1-201ENST00000497982 568 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AC112204.1-201ENST00000502591 103 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AC139783.2-201ENST00000504847 1145 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX4Q06945 NPM1P21-201ENST00000513394 762 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC243972.3-201ENST00000539655 198 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC011611.1-201ENST00000552179 197 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 AL355375.2-201ENST00000574825 175 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 MIR544B-201ENST00000582372 78 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC007621.1-201ENST00000604544 437 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 RMST_3.1-201ENST00000611651 109 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX4Q06945 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.12□□□□□ -1.43
SOX4Q06945 AC073365.1-203ENST00000641055 1992 ntBASIC6.12□□□□□ -1.43
SOX4Q06945 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SOX4Q06945 AC068870.3-201ENST00000625077 2536 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX4Q06945 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX4Q06945 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX4Q06945 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX4Q06945 AC046144.1-201ENST00000478559 1853 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX4Q06945 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 MTND4P27-201ENST00000450813 1354 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 CASC19-221ENST00000641309 1382 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 OR52B1P-201ENST00000316506 909 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 Y_RNA.67-201ENST00000362870 100 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 Y_RNA.166-201ENST00000363730 102 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX4Q06945 RNA5SP91-201ENST00000390902 119 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX4Q06945 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 RPS6P23-201ENST00000413224 722 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 AL133173.1-201ENST00000423458 397 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AL158073.1-201ENST00000426848 1104 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.11□□□□□ -1.43
SOX4Q06945 DYNLL1P7-201ENST00000429273 258 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC006335.2-201ENST00000437993 330 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 RPL7P54-201ENST00000438336 674 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 TXNP5-201ENST00000441043 315 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC092809.1-201ENST00000441469 474 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 AL450023.1-201ENST00000450868 751 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 RN7SL177P-201ENST00000476596 299 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC026427.2-201ENST00000506228 536 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC093809.1-201ENST00000509155 340 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 SNORA48.10-201ENST00000516965 160 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 IGLV3-24-201ENST00000517477 197 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC105029.1-201ENST00000520250 669 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC027309.2-201ENST00000520566 192 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 BRD9P1-201ENST00000529855 560 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX4Q06945 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC090022.1-201ENST00000546569 311 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC008083.2-201ENST00000546707 476 ntBASIC6.11□□□□□ -1.43
SOX4Q06945 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX4Q06945 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX4Q06945 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX4Q06945 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms