Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC091564.1-201ENST00000464563 479 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 CABYRP1-201ENST00000465493 1045 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 RPL21P6-201ENST00000479171 504 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.58□□□□□ -1.68
GABPAQ06546 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.58□□□□□ -1.68
GABPAQ06546 RNA5SP143-201ENST00000516936 115 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.58□□□□□ -1.68
GABPAQ06546 OR5M7P-201ENST00000526140 972 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.58□□□□□ -1.68
GABPAQ06546 AC096553.1-201ENST00000605169 829 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AL450270.1-201ENST00000606160 391 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.58□□□□□ -1.68
GABPAQ06546 AC073592.7-201ENST00000623659 507 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.58□□□□□ -1.68
GABPAQ06546 AC055839.1-201ENST00000634467 498 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AC119674.1-212ENST00000641155 993 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AL596275.2-204ENST00000641628 552 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 AL596275.2-206ENST00000641957 626 ntBASIC4.58□□□□□ -1.68
GABPAQ06546 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
GABPAQ06546 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.58□□□□□ -1.68
GABPAQ06546 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
GABPAQ06546 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.58□□□□□ -1.68
GABPAQ06546 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GABPAQ06546 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
GABPAQ06546 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
GABPAQ06546 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.57□□□□□ -1.68
GABPAQ06546 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.57□□□□□ -1.68
GABPAQ06546 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
GABPAQ06546 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GABPAQ06546 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GABPAQ06546 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
GABPAQ06546 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GABPAQ06546 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
GABPAQ06546 ZNF602P-201ENST00000405929 924 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 SNORA57.3-201ENST00000411095 141 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 USP9YP19-201ENST00000412165 485 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 SYF2P2-201ENST00000417620 583 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 AL591419.1-201ENST00000427423 339 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 GOT2P5-201ENST00000433995 546 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 RANP8-201ENST00000444720 713 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.57□□□□□ -1.68
GABPAQ06546 RPL21P11-201ENST00000461458 483 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.57□□□□□ -1.68
GABPAQ06546 RPL31P61-201ENST00000496160 376 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 STMN1P2-201ENST00000508435 439 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.57□□□□□ -1.68
GABPAQ06546 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.57□□□□□ -1.68
GABPAQ06546 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.57□□□□□ -1.68
GABPAQ06546 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.57□□□□□ -1.68
GABPAQ06546 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.57□□□□□ -1.68
GABPAQ06546 RNU1-30P-201ENST00000606575 163 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.57□□□□□ -1.68
GABPAQ06546 AL669942.2-201ENST00000620352 697 ntBASIC4.57□□□□□ -1.68
GABPAQ06546 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.57□□□□□ -1.68
GABPAQ06546 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
GABPAQ06546 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GABPAQ06546 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.56□□□□□ -1.68
GABPAQ06546 AL359715.4-201ENST00000606629 1436 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.56□□□□□ -1.68
GABPAQ06546 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GABPAQ06546 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GABPAQ06546 RNU6-666P-201ENST00000363499 107 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
GABPAQ06546 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
GABPAQ06546 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 AL139247.1-201ENST00000422768 325 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.56□□□□□ -1.68
GABPAQ06546 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GABPAQ06546 AC104306.1-201ENST00000449702 371 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 NPM1P39-201ENST00000449818 867 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AC022431.1-201ENST00000450941 438 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 UBDP1-202ENST00000457888 382 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 PAICSP4-201ENST00000517543 1253 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.56□□□□□ -1.68
GABPAQ06546 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GABPAQ06546 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.56□□□□□ -1.68
GABPAQ06546 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
GABPAQ06546 AL049634.3-201ENST00000604968 457 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AC015849.2-201ENST00000605738 409 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.56□□□□□ -1.68
GABPAQ06546 AC023813.4-201ENST00000607580 580 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AL353600.1-201ENST00000608148 251 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AC005344.1-201ENST00000613391 459 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.56□□□□□ -1.68
GABPAQ06546 AC025016.1-201ENST00000616746 682 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AL139089.1-201ENST00000620372 975 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 MIR6075-201ENST00000620782 95 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AL356094.1-201ENST00000624663 1212 ntBASIC4.56□□□□□ -1.68
GABPAQ06546 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.56□□□□□ -1.68
GABPAQ06546 AP004289.2-201ENST00000444413 1457 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms