Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC012435.1-202ENST00000568772 240 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 RN7SL690P-201ENST00000582087 240 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC010487.1-201ENST00000594408 1172 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC008083.4-201ENST00000615076 444 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC073348.1-201ENST00000623002 331 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC025574.1-201ENST00000554784 1653 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 AL606537.1-201ENST00000607258 2011 ntBASIC5.33□□□□□ -1.56
CDC42EP1Q00587 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42EP1Q00587 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 RN7SKP216-201ENST00000411050 312 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 CEACAMP8-201ENST00000413902 580 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 RPL26P29-201ENST00000415623 438 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 SKP1P3-201ENST00000429280 487 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AL360221.1-201ENST00000445989 335 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 HSPE1P23-201ENST00000509838 286 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 RN7SKP31-201ENST00000516354 278 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC133555.2-201ENST00000550213 292 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 RN7SL802P-201ENST00000577858 299 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC103987.3-201ENST00000582071 292 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC119751.7-201ENST00000600494 245 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AF131215.7-201ENST00000602443 707 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AP000811.1-201ENST00000603803 651 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 MIR6853-201ENST00000619642 74 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.32□□□□□ -1.56
CDC42EP1Q00587 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.32□□□□□ -1.56
CDC42EP1Q00587 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDC42EP1Q00587 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42EP1Q00587 A2MP1-204ENST00000566278 4130 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 DDX43P2-201ENST00000604753 1354 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 AC011447.7-201ENST00000624228 1590 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42EP1Q00587 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDC42EP1Q00587 RNU6-582P-201ENST00000362989 107 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDC42EP1Q00587 U3.30-201ENST00000391308 210 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 AC013442.1-201ENST00000397347 228 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 AL138880.1-201ENST00000405824 642 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 Y_RNA.625-201ENST00000411256 107 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 DPPA2P2-201ENST00000418220 897 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.31□□□□□ -1.56
CDC42EP1Q00587 RPL31P54-201ENST00000429803 370 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 AL590103.1-201ENST00000434488 307 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 RPS17P8-201ENST00000434525 335 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 RPS25P9-201ENST00000435591 252 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 RPL35AP21-201ENST00000437667 333 ntBASIC5.31□□□□□ -1.56
CDC42EP1Q00587 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms