Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RN7SL308P-201ENST00000464971 297 ntBASIC2.24□□□□□ -2.05
RPS28P62857 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.24□□□□□ -2.05
RPS28P62857 RN7SL815P-201ENST00000470970 290 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC025271.1-201ENST00000485045 429 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC104687.1-201ENST00000485829 412 ntBASIC2.24□□□□□ -2.05
RPS28P62857 RPS27P20-201ENST00000492051 246 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC2.24□□□□□ -2.05
RPS28P62857 AC111193.1-201ENST00000504097 155 ntBASIC2.24□□□□□ -2.05
RPS28P62857 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 B3GNTL1P1-201ENST00000509174 289 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC2.24□□□□□ -2.05
RPS28P62857 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.24□□□□□ -2.05
RPS28P62857 IGKV2-4-201ENST00000523070 340 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC018620.1-201ENST00000523233 379 ntBASIC2.24□□□□□ -2.05
RPS28P62857 IGKV2OR22-4-201ENST00000523309 367 ntBASIC2.24□□□□□ -2.05
RPS28P62857 OR8G5-201ENST00000524943 1041 ntBASIC2.24□□□□□ -2.05
RPS28P62857 CYCSP25-201ENST00000525280 316 ntBASIC2.24□□□□□ -2.05
RPS28P62857 CASP1P2-201ENST00000526830 1258 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.24□□□□□ -2.05
RPS28P62857 OR4A45P-201ENST00000529954 901 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AP002812.5-201ENST00000530972 712 ntTSL 2 BASIC2.24□□□□□ -2.05
RPS28P62857 NDUFA3P2-201ENST00000531434 232 ntBASIC2.24□□□□□ -2.05
RPS28P62857 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RPS28P62857 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.24□□□□□ -2.05
RPS28P62857 TRAV33-201ENST00000557514 338 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.24□□□□□ -2.05
RPS28P62857 MIR3689F-201ENST00000579617 66 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.24□□□□□ -2.05
RPS28P62857 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC2.24□□□□□ -2.05
RPS28P62857 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC2.24□□□□□ -2.05
RPS28P62857 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 AC113403.1-201ENST00000604910 193 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC135178.6-201ENST00000605314 398 ntBASIC2.24□□□□□ -2.05
RPS28P62857 RN7SL3-201ENST00000610674 299 ntBASIC2.24□□□□□ -2.05
RPS28P62857 MIR6076-201ENST00000617521 113 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC2.24□□□□□ -2.05
RPS28P62857 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.24□□□□□ -2.05
RPS28P62857 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 AC073476.4-201ENST00000628409 72 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AC136428.4-201ENST00000634254 1155 ntBASIC2.24□□□□□ -2.05
RPS28P62857 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPS28P62857 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPS28P62857 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPS28P62857 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RPS28P62857 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.24□□□□□ -2.05
RPS28P62857 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
RPS28P62857 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RPS28P62857 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 RNU6-263P-201ENST00000363811 107 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RNU6-673P-201ENST00000365084 104 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RNA5SP152-201ENST00000365184 110 ntBASIC2.23□□□□□ -2.05
RPS28P62857 SNORA64.3-201ENST00000365647 134 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RNA5SP252-201ENST00000391131 119 ntBASIC2.23□□□□□ -2.05
RPS28P62857 CHMP1B2P-201ENST00000399581 597 ntBASIC2.23□□□□□ -2.05
RPS28P62857 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 NUDT19P3-201ENST00000404698 555 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RNU2-25P-201ENST00000411041 191 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RANP4-201ENST00000413361 655 ntBASIC2.23□□□□□ -2.05
RPS28P62857 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC2.23□□□□□ -2.05
RPS28P62857 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.23□□□□□ -2.05
RPS28P62857 AL645937.1-202ENST00000421799 937 ntBASIC2.23□□□□□ -2.05
RPS28P62857 GRPEL2P2-201ENST00000421856 670 ntBASIC2.23□□□□□ -2.05
RPS28P62857 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 AL022331.1-201ENST00000429025 477 ntBASIC2.23□□□□□ -2.05
RPS28P62857 VN1R53P-201ENST00000429536 957 ntBASIC2.23□□□□□ -2.05
RPS28P62857 CYCSP4-201ENST00000429682 331 ntBASIC2.23□□□□□ -2.05
RPS28P62857 FGF12-202ENST00000430714 603 ntTSL 2 BASIC2.23□□□□□ -2.05
RPS28P62857 AC073648.4-201ENST00000442655 781 ntBASIC2.23□□□□□ -2.05
RPS28P62857 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
RPS28P62857 AL590648.1-201ENST00000456479 460 ntBASIC2.23□□□□□ -2.05
RPS28P62857 AC091564.1-201ENST00000464563 479 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RN7SL826P-201ENST00000479724 288 ntBASIC2.23□□□□□ -2.05
RPS28P62857 UBA52P7-201ENST00000486088 380 ntBASIC2.23□□□□□ -2.05
RPS28P62857 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 AC016559.1-201ENST00000511420 199 ntBASIC2.23□□□□□ -2.05
RPS28P62857 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC2.23□□□□□ -2.05
RPS28P62857 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RPS28P62857 RN7SKP116-201ENST00000516902 319 ntBASIC2.23□□□□□ -2.05
RPS28P62857 RN7SKP40-201ENST00000517211 242 ntBASIC2.23□□□□□ -2.05
RPS28P62857 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.23□□□□□ -2.05
RPS28P62857 OR7E13P-201ENST00000526052 910 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms