Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.49□□□□□ -1.53
RHBDL3P58872 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RHBDL3P58872 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AL356967.1-201ENST00000406305 431 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 RPL31P45-201ENST00000419532 356 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AL356387.2-201ENST00000422272 243 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 CKS1BP6-201ENST00000424932 240 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 IFNNP1-201ENST00000429219 553 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AC004938.1-201ENST00000438468 308 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.49□□□□□ -1.53
RHBDL3P58872 NF1P3-201ENST00000457709 450 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 RPL21P126-201ENST00000470049 478 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 RPL21P103-201ENST00000479921 488 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.49□□□□□ -1.53
RHBDL3P58872 DYNLL1P6-201ENST00000503440 264 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AC109471.1-201ENST00000511631 612 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AP001207.2-201ENST00000519490 539 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.49□□□□□ -1.53
RHBDL3P58872 MTCYBP23-201ENST00000558717 1102 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC093519.1-201ENST00000566109 298 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.49□□□□□ -1.53
RHBDL3P58872 KPNA2P3-201ENST00000584190 848 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.49□□□□□ -1.53
RHBDL3P58872 AL445435.1-201ENST00000604232 665 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC010975.3-201ENST00000618727 978 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 AC011944.2-201ENST00000624440 683 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RHBDL3P58872 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.49□□□□□ -1.53
RHBDL3P58872 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.49□□□□□ -1.53
RHBDL3P58872 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 AL121839.2-201ENST00000565058 6943 ntBASIC5.49□□□□□ -1.53
RHBDL3P58872 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RHBDL3P58872 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDL3P58872 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RHBDL3P58872 MFSD8-220ENST00000641243 1422 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AC106754.1-201ENST00000562632 1513 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
RHBDL3P58872 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RHBDL3P58872 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDL3P58872 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDL3P58872 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.48□□□□□ -1.53
RHBDL3P58872 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.48□□□□□ -1.53
RHBDL3P58872 AC108467.2-201ENST00000617640 1597 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AC005261.4-201ENST00000600047 1385 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RHBDL3P58872 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 RNU6-1243P-201ENST00000364028 107 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 SNORA72.3-201ENST00000365074 132 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 Z98745.1-201ENST00000402553 494 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AL078604.1-201ENST00000404609 466 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 ZNF603P-201ENST00000405613 487 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.48□□□□□ -1.53
RHBDL3P58872 C1DP1-201ENST00000426049 402 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 RPP40P1-201ENST00000426762 456 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.48□□□□□ -1.53
RHBDL3P58872 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.48□□□□□ -1.53
RHBDL3P58872 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDL3P58872 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDL3P58872 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 NDUFA5P7-201ENST00000452914 242 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 ISCUP1-201ENST00000454451 448 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 DUXAP8-207ENST00000456786 622 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.48□□□□□ -1.53
RHBDL3P58872 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.48□□□□□ -1.53
RHBDL3P58872 UBE2V1P12-201ENST00000503954 474 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.48□□□□□ -1.53
RHBDL3P58872 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.48□□□□□ -1.53
RHBDL3P58872 RN7SKP157-201ENST00000516174 282 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 OR7E13P-201ENST00000526052 910 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDL3P58872 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.48□□□□□ -1.53
RHBDL3P58872 PARP1P2-201ENST00000556806 195 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 ATP5J2P6-201ENST00000565203 266 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 RN7SL339P-201ENST00000580597 296 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AC105148.1-201ENST00000604961 409 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AC113194.1-201ENST00000606037 500 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 DUXAP10-204ENST00000612052 616 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AC006338.2-201ENST00000616864 791 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDL3P58872 OR4G3P-201ENST00000633500 913 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms