Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
VSX2P58304 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VSX2P58304 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.79□□□□□ -1.8
VSX2P58304 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.79□□□□□ -1.8
VSX2P58304 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.79□□□□□ -1.8
VSX2P58304 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.79□□□□□ -1.8
VSX2P58304 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AL645927.2-201ENST00000618350 349 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AL139089.1-201ENST00000620372 975 ntBASIC3.79□□□□□ -1.8
VSX2P58304 AC124312.6-202ENST00000623624 418 ntBASIC3.79□□□□□ -1.8
VSX2P58304 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.79□□□□□ -1.8
VSX2P58304 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VSX2P58304 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
VSX2P58304 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.79□□□□□ -1.8
VSX2P58304 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.79□□□□□ -1.8
VSX2P58304 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
VSX2P58304 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 AL627171.1-201ENST00000618845 1308 ntBASIC3.78□□□□□ -1.8
VSX2P58304 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
VSX2P58304 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX2P58304 RNU6-244P-201ENST00000391028 104 ntBASIC3.78□□□□□ -1.8
VSX2P58304 SNORA3C-201ENST00000408792 125 ntBASIC3.78□□□□□ -1.8
VSX2P58304 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.78□□□□□ -1.8
VSX2P58304 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX2P58304 ELOCP10-201ENST00000440624 327 ntBASIC3.78□□□□□ -1.8
VSX2P58304 MTND2P25-201ENST00000449028 610 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.78□□□□□ -1.8
VSX2P58304 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX2P58304 AC104629.2-201ENST00000468627 598 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC021087.2-201ENST00000504656 1203 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX2P58304 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
VSX2P58304 MTND4LP31-201ENST00000514859 294 ntBASIC3.78□□□□□ -1.8
VSX2P58304 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.78□□□□□ -1.8
VSX2P58304 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
VSX2P58304 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.78□□□□□ -1.8
VSX2P58304 HIGD1AP18-201ENST00000520730 278 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX2P58304 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.78□□□□□ -1.8
VSX2P58304 CBX3P5-201ENST00000552017 521 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.78□□□□□ -1.8
VSX2P58304 AC084757.1-201ENST00000559987 490 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AL360157.1-201ENST00000565962 87 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.78□□□□□ -1.8
VSX2P58304 RN7SL703P-201ENST00000578485 302 ntBASIC3.78□□□□□ -1.8
VSX2P58304 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.78□□□□□ -1.8
VSX2P58304 AC068020.1-201ENST00000594215 661 ntBASIC3.78□□□□□ -1.8
VSX2P58304 ELOCP34-201ENST00000604436 327 ntBASIC3.78□□□□□ -1.8
VSX2P58304 HMGB1P50-201ENST00000605814 607 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AP000255.1-201ENST00000610276 676 ntBASIC3.78□□□□□ -1.8
VSX2P58304 uc_338.32-201ENST00000615087 172 ntBASIC3.78□□□□□ -1.8
VSX2P58304 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.8
VSX2P58304 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX2P58304 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
VSX2P58304 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.78□□□□□ -1.8
VSX2P58304 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.78□□□□□ -1.8
VSX2P58304 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
VSX2P58304 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.78□□□□□ -1.8
VSX2P58304 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VSX2P58304 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
VSX2P58304 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.78□□□□□ -1.81
VSX2P58304 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
VSX2P58304 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VSX2P58304 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
VSX2P58304 AC007342.7-201ENST00000624610 2337 ntBASIC3.77□□□□□ -1.81
VSX2P58304 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX2P58304 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VSX2P58304 MIR134-201ENST00000385258 73 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AC244453.4-201ENST00000419150 388 ntBASIC3.77□□□□□ -1.81
VSX2P58304 Z97055.1-201ENST00000419730 712 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 MTCO1P54-201ENST00000430139 712 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX2P58304 AC007563.3-201ENST00000433233 371 ntBASIC3.77□□□□□ -1.81
VSX2P58304 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX2P58304 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 RANP8-201ENST00000444720 713 ntBASIC3.77□□□□□ -1.81
VSX2P58304 RN7SL132P-201ENST00000478131 296 ntBASIC3.77□□□□□ -1.81
VSX2P58304 GAPDHP36-201ENST00000480688 918 ntBASIC3.77□□□□□ -1.81
VSX2P58304 RPS3AP6-201ENST00000484430 795 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.77□□□□□ -1.81
VSX2P58304 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VSX2P58304 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.77□□□□□ -1.81
VSX2P58304 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.77□□□□□ -1.81
VSX2P58304 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.77□□□□□ -1.81
VSX2P58304 GNRHR2P1-201ENST00000555315 631 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AC074050.1-201ENST00000563247 211 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AC015726.1-201ENST00000602353 681 ntBASIC3.77□□□□□ -1.81
VSX2P58304 AC145207.9-201ENST00000623802 325 ntBASIC3.77□□□□□ -1.81
VSX2P58304 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms