Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AL121834.1-202ENST00000404494 277 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.86□□□□□ -1.79
CLDN6P56747 GSTM3P2-201ENST00000412746 530 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN6P56747 SYF2P2-201ENST00000417620 583 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 BTF3P9-201ENST00000418784 283 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN6P56747 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 AL353898.1-201ENST00000444055 238 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AL162388.1-201ENST00000450912 352 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 RPL5P30-201ENST00000465511 891 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 RPL7P1-201ENST00000468161 747 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 RPL7P9-201ENST00000468715 747 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.86□□□□□ -1.79
CLDN6P56747 AC113430.1-201ENST00000506872 718 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 RNA5SP179-201ENST00000517284 121 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 MYL12AP1-201ENST00000518490 515 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.86□□□□□ -1.79
CLDN6P56747 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN6P56747 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AC114878.2-201ENST00000604863 1251 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 AL451044.1-201ENST00000604867 238 ntBASIC3.86□□□□□ -1.79
CLDN6P56747 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN6P56747 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.86□□□□□ -1.79
CLDN6P56747 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLDN6P56747 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
CLDN6P56747 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN6P56747 RNA5SP52-201ENST00000362448 134 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 RNU6-670P-201ENST00000364312 104 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.85□□□□□ -1.79
CLDN6P56747 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN6P56747 GSTA12P-201ENST00000402398 508 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 LAP3P1-201ENST00000403648 294 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 MIR1179-201ENST00000408703 91 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AL160275.2-201ENST00000412010 394 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.85□□□□□ -1.79
CLDN6P56747 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 TRGV6-201ENST00000417928 299 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 MTND2P15-201ENST00000418575 892 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN6P56747 NPM1P24-201ENST00000428039 894 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN6P56747 PRDX3P3-201ENST00000447765 522 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN6P56747 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.85□□□□□ -1.79
CLDN6P56747 AC108145.1-201ENST00000503770 153 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC026427.2-201ENST00000506228 536 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC021146.7-201ENST00000509604 775 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC104619.4-201ENST00000510773 249 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 RNA5SP154-201ENST00000516193 111 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 HIGD1AP18-201ENST00000520730 278 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 IGKV2D-19-201ENST00000523346 262 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.85□□□□□ -1.79
CLDN6P56747 AC093014.1-201ENST00000548926 724 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC092868.3-201ENST00000560515 784 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AC037471.2-201ENST00000564941 598 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 ADAM3B-201ENST00000569937 840 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.85□□□□□ -1.79
CLDN6P56747 AC015813.4-201ENST00000610469 179 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 CFTRP2-201ENST00000634304 199 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN6P56747 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CLDN6P56747 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CLDN6P56747 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CLDN6P56747 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CLDN6P56747 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN6P56747 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.85□□□□□ -1.79
CLDN6P56747 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN6P56747 AC022893.2-201ENST00000564832 3296 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 MTCO1P12-201ENST00000414273 1543 ntBASIC3.85□□□□□ -1.79
CLDN6P56747 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN6P56747 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLDN6P56747 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 AL592437.2-201ENST00000421655 2434 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CLDN6P56747 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CLDN6P56747 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CLDN6P56747 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLDN6P56747 OR52E6-202ENST00000379946 954 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 RNVU1-14-201ENST00000384770 164 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLDN6P56747 RPS29P4-201ENST00000414733 161 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN6P56747 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN6P56747 AC009965.2-201ENST00000425328 970 ntBASIC3.84□□□□□ -1.79
CLDN6P56747 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.84□□□□□ -1.79
CLDN6P56747 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.84□□□□□ -1.79
CLDN6P56747 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms