Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.09□□□□□ -1.59
COPAP53621 AL450992.3-201ENST00000413192 568 ntBASIC5.09□□□□□ -1.59
COPAP53621 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.09□□□□□ -1.59
COPAP53621 AL590139.1-201ENST00000416267 400 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC006960.1-201ENST00000419980 153 ntBASIC5.09□□□□□ -1.59
COPAP53621 MRPS36P1-201ENST00000421291 307 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.09□□□□□ -1.59
COPAP53621 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.09□□□□□ -1.59
COPAP53621 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.09□□□□□ -1.59
COPAP53621 AC009238.2-201ENST00000431026 355 ntBASIC5.09□□□□□ -1.59
COPAP53621 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.09□□□□□ -1.59
COPAP53621 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 AC092393.1-201ENST00000439625 742 ntBASIC5.09□□□□□ -1.59
COPAP53621 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
COPAP53621 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.09□□□□□ -1.59
COPAP53621 OR52J1P-201ENST00000450596 932 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC063943.1-201ENST00000465434 453 ntBASIC5.09□□□□□ -1.59
COPAP53621 RN7SL319P-201ENST00000480656 221 ntBASIC5.09□□□□□ -1.59
COPAP53621 BET1P1-201ENST00000482276 359 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.09□□□□□ -1.59
COPAP53621 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 GAPDHP56-201ENST00000506031 988 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC008885.2-201ENST00000509506 930 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC008837.2-201ENST00000513076 418 ntBASIC5.09□□□□□ -1.59
COPAP53621 MTCO1P47-201ENST00000523889 1271 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 PDCL2P2-201ENST00000533651 189 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 UBE2FP2-201ENST00000566646 462 ntBASIC5.09□□□□□ -1.59
COPAP53621 AL109653.1-201ENST00000603091 248 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC091488.1-201ENST00000604239 660 ntBASIC5.09□□□□□ -1.59
COPAP53621 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.09□□□□□ -1.59
COPAP53621 AC234782.5-201ENST00000617723 324 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC022106.2-201ENST00000620114 757 ntBASIC5.09□□□□□ -1.59
COPAP53621 AC015804.1-201ENST00000622935 435 ntBASIC5.09□□□□□ -1.59
COPAP53621 AP006248.2-201ENST00000623309 592 ntBASIC5.09□□□□□ -1.59
COPAP53621 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 MIR3974-201ENST00000637126 96 ntBASIC5.09□□□□□ -1.59
COPAP53621 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.09□□□□□ -1.59
COPAP53621 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
COPAP53621 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COPAP53621 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
COPAP53621 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
COPAP53621 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 SNORD113-6-201ENST00000363345 75 ntBASIC5.08□□□□□ -1.6
COPAP53621 RNU6-839P-201ENST00000363347 108 ntBASIC5.08□□□□□ -1.6
COPAP53621 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 SNORA2.3-201ENST00000383920 135 ntBASIC5.08□□□□□ -1.6
COPAP53621 SNORA77-201ENST00000408716 125 ntBASIC5.08□□□□□ -1.6
COPAP53621 NRBF2P2-201ENST00000413087 861 ntBASIC5.08□□□□□ -1.6
COPAP53621 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 AL138785.1-201ENST00000425821 331 ntBASIC5.08□□□□□ -1.6
COPAP53621 USP9YP31-201ENST00000431405 881 ntBASIC5.08□□□□□ -1.6
COPAP53621 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 AC093155.1-201ENST00000440164 826 ntBASIC5.08□□□□□ -1.6
COPAP53621 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 RPL7P59-201ENST00000447700 943 ntBASIC5.08□□□□□ -1.6
COPAP53621 RPL7P31-201ENST00000450192 724 ntBASIC5.08□□□□□ -1.6
COPAP53621 GYG1P1-201ENST00000460864 698 ntBASIC5.08□□□□□ -1.6
COPAP53621 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.08□□□□□ -1.6
COPAP53621 AC011352.3-201ENST00000505162 593 ntBASIC5.08□□□□□ -1.6
COPAP53621 OR5H4P-201ENST00000510851 923 ntBASIC5.08□□□□□ -1.6
COPAP53621 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 HIGD1AP6-201ENST00000521833 279 ntBASIC5.08□□□□□ -1.6
COPAP53621 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.08□□□□□ -1.6
COPAP53621 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 AC079075.1-201ENST00000559543 878 ntBASIC5.08□□□□□ -1.6
COPAP53621 AC087465.1-201ENST00000560574 245 ntBASIC5.08□□□□□ -1.6
COPAP53621 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 AC233702.9-201ENST00000581528 203 ntBASIC5.08□□□□□ -1.6
COPAP53621 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.08□□□□□ -1.6
COPAP53621 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.08□□□□□ -1.6
COPAP53621 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.08□□□□□ -1.6
COPAP53621 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
COPAP53621 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPAP53621 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.08□□□□□ -1.6
COPAP53621 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms