Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.31□□□□□ -1.72
ACLYP53396 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ACLYP53396 AC090971.4-201ENST00000560291 1800 ntBASIC4.31□□□□□ -1.72
ACLYP53396 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 RNU6-618P-201ENST00000363518 112 ntBASIC4.31□□□□□ -1.72
ACLYP53396 RPS24P12-201ENST00000402084 394 ntBASIC4.31□□□□□ -1.72
ACLYP53396 AL121834.1-202ENST00000404494 277 ntBASIC4.31□□□□□ -1.72
ACLYP53396 SNORA11.2-201ENST00000408318 127 ntBASIC4.31□□□□□ -1.72
ACLYP53396 RPL7AP73-201ENST00000413490 353 ntBASIC4.31□□□□□ -1.72
ACLYP53396 AC245052.5-201ENST00000416320 649 ntBASIC4.31□□□□□ -1.72
ACLYP53396 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.31□□□□□ -1.72
ACLYP53396 TMX2P1-201ENST00000436507 708 ntBASIC4.31□□□□□ -1.72
ACLYP53396 ELOCP10-201ENST00000440624 327 ntBASIC4.31□□□□□ -1.72
ACLYP53396 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.31□□□□□ -1.72
ACLYP53396 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.31□□□□□ -1.72
ACLYP53396 AL358832.1-201ENST00000497800 389 ntBASIC4.31□□□□□ -1.72
ACLYP53396 RN7SKP18-201ENST00000516005 275 ntBASIC4.31□□□□□ -1.72
ACLYP53396 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.31□□□□□ -1.72
ACLYP53396 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.31□□□□□ -1.72
ACLYP53396 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.31□□□□□ -1.72
ACLYP53396 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.31□□□□□ -1.72
ACLYP53396 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.31□□□□□ -1.72
ACLYP53396 AC022968.1-201ENST00000567372 442 ntBASIC4.31□□□□□ -1.72
ACLYP53396 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.31□□□□□ -1.72
ACLYP53396 MIR5195-201ENST00000583555 115 ntBASIC4.31□□□□□ -1.72
ACLYP53396 AC123786.2-201ENST00000603459 275 ntBASIC4.31□□□□□ -1.72
ACLYP53396 ELOCP34-201ENST00000604436 327 ntBASIC4.31□□□□□ -1.72
ACLYP53396 AC124312.6-202ENST00000623624 418 ntBASIC4.31□□□□□ -1.72
ACLYP53396 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.31□□□□□ -1.72
ACLYP53396 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ACLYP53396 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ACLYP53396 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ACLYP53396 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 RNA5SP51-201ENST00000364750 119 ntBASIC4.3□□□□□ -1.72
ACLYP53396 OR52E6-202ENST00000379946 954 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AC240504.1-201ENST00000395709 845 ntBASIC4.3□□□□□ -1.72
ACLYP53396 MIR1251-201ENST00000408552 70 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.3□□□□□ -1.72
ACLYP53396 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.3□□□□□ -1.72
ACLYP53396 TCEA1P2-201ENST00000420496 906 ntBASIC4.3□□□□□ -1.72
ACLYP53396 RPL7P4-203ENST00000430239 730 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 Z74696.2-201ENST00000436514 498 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AL353748.1-201ENST00000440753 474 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.3□□□□□ -1.72
ACLYP53396 EIF4A1P11-201ENST00000451239 222 ntBASIC4.3□□□□□ -1.72
ACLYP53396 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.3□□□□□ -1.72
ACLYP53396 PSMC1P13-201ENST00000458195 985 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AC104629.2-201ENST00000468627 598 ntBASIC4.3□□□□□ -1.72
ACLYP53396 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 ATG10-AS1-201ENST00000504846 648 ntBASIC4.3□□□□□ -1.72
ACLYP53396 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.3□□□□□ -1.72
ACLYP53396 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.3□□□□□ -1.72
ACLYP53396 AC022695.1-201ENST00000522089 237 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.3□□□□□ -1.72
ACLYP53396 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.3□□□□□ -1.72
ACLYP53396 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.3□□□□□ -1.72
ACLYP53396 AC068714.1-201ENST00000559623 800 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AC018552.3-201ENST00000567416 561 ntBASIC4.3□□□□□ -1.72
ACLYP53396 SLC25A36P1-201ENST00000590111 465 ntBASIC4.3□□□□□ -1.72
ACLYP53396 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.3□□□□□ -1.72
ACLYP53396 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.3□□□□□ -1.72
ACLYP53396 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.3□□□□□ -1.72
ACLYP53396 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.3□□□□□ -1.72
ACLYP53396 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ACLYP53396 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ACLYP53396 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
ACLYP53396 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.29□□□□□ -1.72
ACLYP53396 MARK2P15-201ENST00000432204 2186 ntBASIC4.29□□□□□ -1.72
ACLYP53396 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ACLYP53396 AC011155.1-201ENST00000316512 456 ntBASIC4.29□□□□□ -1.72
ACLYP53396 MIR218-2-201ENST00000385006 110 ntBASIC4.29□□□□□ -1.72
ACLYP53396 RN7SKP222-201ENST00000410651 315 ntBASIC4.29□□□□□ -1.72
ACLYP53396 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.29□□□□□ -1.72
ACLYP53396 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.29□□□□□ -1.72
ACLYP53396 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.29□□□□□ -1.72
ACLYP53396 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.29□□□□□ -1.72
ACLYP53396 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.29□□□□□ -1.72
ACLYP53396 Z85994.2-201ENST00000434327 452 ntBASIC4.29□□□□□ -1.72
ACLYP53396 AC083863.1-201ENST00000438811 231 ntBASIC4.29□□□□□ -1.72
ACLYP53396 ARL5AP3-201ENST00000439327 386 ntBASIC4.29□□□□□ -1.72
ACLYP53396 RANP8-201ENST00000444720 713 ntBASIC4.29□□□□□ -1.72
ACLYP53396 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.29□□□□□ -1.72
ACLYP53396 CYCSP35-201ENST00000451978 304 ntBASIC4.29□□□□□ -1.72
ACLYP53396 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms