Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NUBP1P53384 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC7.66□□□□□ -1.18
NUBP1P53384 SNORA25.1-201ENST00000362326 128 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.82-201ENST00000363000 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.92-201ENST00000363043 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.235-201ENST00000364412 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.275-201ENST00000364726 110 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.306-201ENST00000365015 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.312-201ENST00000365089 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.322-201ENST00000365151 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 RNU6-449P-201ENST00000383914 107 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NUBP1P53384 SNORA12.2-201ENST00000391040 156 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.586-201ENST00000391146 98 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 LDHAP5-201ENST00000394996 622 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 RPL31P2-201ENST00000413849 377 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AL353621.1-201ENST00000418219 243 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 OR6D1P-201ENST00000436165 939 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AC144530.1-201ENST00000452862 555 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.650-201ENST00000459002 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 RPL23AP65-201ENST00000475608 468 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.777-201ENST00000516982 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AP003084.1-201ENST00000524828 742 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 SNRPGP16-201ENST00000533275 226 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.66□□□□□ -1.18
NUBP1P53384 MIR4800-201ENST00000537353 80 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.66□□□□□ -1.18
NUBP1P53384 MT1L-202ENST00000566367 78 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AC104581.2-201ENST00000572227 430 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 MIR3663-201ENST00000583207 97 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 NF1P5-201ENST00000588287 448 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.771-201ENST00000598668 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AL359881.1-201ENST00000602916 267 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 AC141002.1-201ENST00000607025 279 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.66□□□□□ -1.18
NUBP1P53384 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 MIR6130-201ENST00000619419 109 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 Y_RNA.789-201ENST00000622480 102 ntBASIC7.66□□□□□ -1.18
NUBP1P53384 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.66□□□□□ -1.18
NUBP1P53384 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.66□□□□□ -1.18
NUBP1P53384 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NUBP1P53384 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.66□□□□□ -1.18
NUBP1P53384 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC7.66□□□□□ -1.18
NUBP1P53384 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NUBP1P53384 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NUBP1P53384 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NUBP1P53384 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NUBP1P53384 RPS15AP40-201ENST00000419621 391 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 USP9YP7-201ENST00000436723 430 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.65□□□□□ -1.18
NUBP1P53384 AC005077.1-201ENST00000449226 375 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC7.65□□□□□ -1.18
NUBP1P53384 USP9YP32-201ENST00000452432 430 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AL354710.1-201ENST00000453641 246 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC018638.3-201ENST00000461273 132 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC091179.1-201ENST00000461606 579 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC7.65□□□□□ -1.18
NUBP1P53384 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NUBP1P53384 RN7SL568P-201ENST00000493069 298 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 RPL30P11-201ENST00000495304 339 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 AC024451.1-201ENST00000508013 779 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC006427.1-201ENST00000514359 712 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.65□□□□□ -1.18
NUBP1P53384 RPL10P19-201ENST00000519013 301 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC7.65□□□□□ -1.18
NUBP1P53384 MTND6P19-201ENST00000519399 524 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.65□□□□□ -1.18
NUBP1P53384 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC7.65□□□□□ -1.18
NUBP1P53384 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.65□□□□□ -1.18
NUBP1P53384 AC009955.2-201ENST00000597288 542 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AP000787.2-201ENST00000604432 568 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC7.65□□□□□ -1.18
NUBP1P53384 MIR6127-201ENST00000614019 109 ntBASIC7.65□□□□□ -1.18
NUBP1P53384 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.65□□□□□ -1.18
NUBP1P53384 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms