Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RN7SKP124-201ENST00000364730 341 ntBASIC6.33□□□□□ -1.4
USP11P51784 RNU6-877P-201ENST00000383868 107 ntBASIC6.33□□□□□ -1.4
USP11P51784 Y_RNA.409-201ENST00000383990 98 ntBASIC6.33□□□□□ -1.4
USP11P51784 RNU6-483P-201ENST00000384088 108 ntBASIC6.33□□□□□ -1.4
USP11P51784 RNU4-31P-201ENST00000384211 141 ntBASIC6.33□□□□□ -1.4
USP11P51784 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
USP11P51784 RPL23AP29-201ENST00000397284 453 ntBASIC6.33□□□□□ -1.4
USP11P51784 Y_RNA.598-201ENST00000410480 95 ntBASIC6.33□□□□□ -1.4
USP11P51784 RNU4-55P-201ENST00000410731 137 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL354868.1-201ENST00000417077 482 ntBASIC6.33□□□□□ -1.4
USP11P51784 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 OR6D1P-201ENST00000436165 939 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.33□□□□□ -1.4
USP11P51784 AL831737.1-201ENST00000441288 271 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL161722.1-201ENST00000446972 1032 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 RAD23BP3-201ENST00000454157 1152 ntBASIC6.33□□□□□ -1.4
USP11P51784 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.33□□□□□ -1.4
USP11P51784 RN7SL174P-201ENST00000475578 289 ntBASIC6.33□□□□□ -1.4
USP11P51784 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.33□□□□□ -1.4
USP11P51784 AF131216.2-201ENST00000512316 564 ntBASIC6.33□□□□□ -1.4
USP11P51784 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.33□□□□□ -1.4
USP11P51784 AC109635.6-201ENST00000525487 1113 ntBASIC6.33□□□□□ -1.4
USP11P51784 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 AC122688.1-201ENST00000541494 223 ntBASIC6.33□□□□□ -1.4
USP11P51784 CBX3P5-201ENST00000552017 521 ntBASIC6.33□□□□□ -1.4
USP11P51784 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 AC007448.1-201ENST00000582714 234 ntBASIC6.33□□□□□ -1.4
USP11P51784 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.33□□□□□ -1.4
USP11P51784 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.33□□□□□ -1.4
USP11P51784 SUGT1P3-202ENST00000604259 383 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL360085.1-201ENST00000604713 532 ntBASIC6.33□□□□□ -1.4
USP11P51784 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 AC015712.7-201ENST00000615211 635 ntBASIC6.33□□□□□ -1.4
USP11P51784 YWHAEP7-203ENST00000622054 312 ntBASIC6.33□□□□□ -1.4
USP11P51784 AC132068.1-201ENST00000623805 459 ntBASIC6.33□□□□□ -1.4
USP11P51784 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.33□□□□□ -1.4
USP11P51784 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.33□□□□□ -1.4
USP11P51784 AC140134.1-201ENST00000511830 3544 ntBASIC6.33□□□□□ -1.4
USP11P51784 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
USP11P51784 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
USP11P51784 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
USP11P51784 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 Y_RNA.97-201ENST00000363094 102 ntBASIC6.32□□□□□ -1.4
USP11P51784 RNU6-1339P-201ENST00000363574 91 ntBASIC6.32□□□□□ -1.4
USP11P51784 MIR16-1-201ENST00000385271 89 ntBASIC6.32□□□□□ -1.4
USP11P51784 FCF1P2-201ENST00000415284 583 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL590806.1-201ENST00000415818 853 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 RIMKLBP2-201ENST00000424737 654 ntBASIC6.32□□□□□ -1.4
USP11P51784 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 AL513185.2-201ENST00000425543 193 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL009174.1-201ENST00000426577 416 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL121776.1-201ENST00000429337 372 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL358934.1-201ENST00000432346 324 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL138787.1-202ENST00000437804 898 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.32□□□□□ -1.4
USP11P51784 AC012170.1-201ENST00000495139 359 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL136038.1-201ENST00000497246 351 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.32□□□□□ -1.4
USP11P51784 AC114967.1-201ENST00000504890 259 ntBASIC6.32□□□□□ -1.4
USP11P51784 NAF1-205ENST00000509434 385 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 FGF7P4-201ENST00000509595 295 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 AC022690.1-201ENST00000526681 550 ntBASIC6.32□□□□□ -1.4
USP11P51784 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.32□□□□□ -1.4
USP11P51784 AL157394.1-201ENST00000562983 1224 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.32□□□□□ -1.4
USP11P51784 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.32□□□□□ -1.4
USP11P51784 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
USP11P51784 AC012616.1-201ENST00000600294 197 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.32□□□□□ -1.4
USP11P51784 LLPHP1-201ENST00000603571 367 ntBASIC6.32□□□□□ -1.4
USP11P51784 AL596327.1-201ENST00000603629 213 ntBASIC6.32□□□□□ -1.4
USP11P51784 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.32□□□□□ -1.4
USP11P51784 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
USP11P51784 CYP1D1P-201ENST00000416662 1433 ntBASIC6.32□□□□□ -1.4
USP11P51784 ZNF37BP-203ENST00000452306 1352 ntBASIC6.31□□□□□ -1.4
USP11P51784 AP002512.4-202ENST00000641599 4530 ntBASIC6.31□□□□□ -1.4
USP11P51784 AC083899.1-201ENST00000454465 3819 ntBASIC6.31□□□□□ -1.4
USP11P51784 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
USP11P51784 DCAF13P1-201ENST00000495256 1330 ntBASIC6.31□□□□□ -1.4
USP11P51784 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
USP11P51784 CCT4P2-201ENST00000233836 1548 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms