Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNA5SP130-201ENST00000364431 114 ntBASIC3.44□□□□□ -1.86
SRP9P49458 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP9P49458 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SRP9P49458 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SRP9P49458 EI24P2-201ENST00000397776 1076 ntBASIC3.44□□□□□ -1.86
SRP9P49458 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.44□□□□□ -1.86
SRP9P49458 HSPE1P8-201ENST00000406997 288 ntBASIC3.44□□□□□ -1.86
SRP9P49458 MTHFD2P2-201ENST00000407725 247 ntBASIC3.44□□□□□ -1.86
SRP9P49458 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.44□□□□□ -1.86
SRP9P49458 TPT1P2-201ENST00000413105 503 ntBASIC3.44□□□□□ -1.86
SRP9P49458 MTND4LP21-201ENST00000415303 295 ntBASIC3.44□□□□□ -1.86
SRP9P49458 AL358472.1-201ENST00000431295 329 ntBASIC3.44□□□□□ -1.86
SRP9P49458 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP9P49458 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP9P49458 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.44□□□□□ -1.86
SRP9P49458 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP9P49458 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.44□□□□□ -1.86
SRP9P49458 MTCO3P20-201ENST00000454926 688 ntBASIC3.44□□□□□ -1.86
SRP9P49458 SNRPGP3-201ENST00000469405 227 ntBASIC3.44□□□□□ -1.86
SRP9P49458 RPL7P24-201ENST00000493052 752 ntBASIC3.44□□□□□ -1.86
SRP9P49458 UBE2CP3-201ENST00000502715 450 ntBASIC3.44□□□□□ -1.86
SRP9P49458 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.44□□□□□ -1.86
SRP9P49458 AC091516.1-201ENST00000549191 703 ntBASIC3.44□□□□□ -1.86
SRP9P49458 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP9P49458 AL389895.1-201ENST00000554127 252 ntBASIC3.44□□□□□ -1.86
SRP9P49458 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.44□□□□□ -1.86
SRP9P49458 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.44□□□□□ -1.86
SRP9P49458 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.44□□□□□ -1.86
SRP9P49458 AC022146.1-201ENST00000595307 847 ntBASIC3.44□□□□□ -1.86
SRP9P49458 AC006254.3-201ENST00000603353 884 ntBASIC3.44□□□□□ -1.86
SRP9P49458 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.44□□□□□ -1.86
SRP9P49458 AC114878.2-201ENST00000604863 1251 ntBASIC3.44□□□□□ -1.86
SRP9P49458 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP9P49458 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SRP9P49458 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SRP9P49458 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP9P49458 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP9P49458 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.44□□□□□ -1.86
SRP9P49458 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SRP9P49458 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SRP9P49458 GABPAP-201ENST00000419271 1356 ntBASIC3.43□□□□□ -1.86
SRP9P49458 RNA5SP167-201ENST00000365461 116 ntBASIC3.43□□□□□ -1.86
SRP9P49458 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SRP9P49458 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP9P49458 RNA5SP317-201ENST00000410176 116 ntBASIC3.43□□□□□ -1.86
SRP9P49458 RNU6-628P-201ENST00000410675 107 ntBASIC3.43□□□□□ -1.86
SRP9P49458 RNA5SP311-201ENST00000411290 116 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AL356095.1-201ENST00000417217 199 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP9P49458 NIPA2P1-201ENST00000426223 976 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.43□□□□□ -1.86
SRP9P49458 AC091390.1-201ENST00000433904 331 ntBASIC3.43□□□□□ -1.86
SRP9P49458 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.43□□□□□ -1.86
SRP9P49458 SKP1P1-201ENST00000438081 489 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP9P49458 HSFY6P-201ENST00000445573 403 ntBASIC3.43□□□□□ -1.86
SRP9P49458 RPL7AP52-201ENST00000458096 790 ntBASIC3.43□□□□□ -1.86
SRP9P49458 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AC068587.1-201ENST00000483613 781 ntBASIC3.43□□□□□ -1.86
SRP9P49458 PRELID3BP5-201ENST00000508612 460 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP9P49458 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SRP9P49458 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP9P49458 RNA5SP315-201ENST00000516340 116 ntBASIC3.43□□□□□ -1.86
SRP9P49458 RNA5SP312-201ENST00000517068 116 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP9P49458 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP9P49458 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.43□□□□□ -1.86
SRP9P49458 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.43□□□□□ -1.86
SRP9P49458 AL121576.1-201ENST00000556055 276 ntBASIC3.43□□□□□ -1.86
SRP9P49458 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP9P49458 AC007687.1-201ENST00000602704 304 ntBASIC3.43□□□□□ -1.86
SRP9P49458 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.43□□□□□ -1.86
SRP9P49458 MIR8058-201ENST00000615737 89 ntBASIC3.43□□□□□ -1.86
SRP9P49458 MIR6810-201ENST00000622701 70 ntBASIC3.43□□□□□ -1.86
SRP9P49458 AC091905.1-201ENST00000624400 311 ntBASIC3.43□□□□□ -1.86
SRP9P49458 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
SRP9P49458 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.43□□□□□ -1.86
SRP9P49458 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.43□□□□□ -1.86
SRP9P49458 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SRP9P49458 AC000367.1-201ENST00000452711 1766 ntBASIC3.43□□□□□ -1.86
SRP9P49458 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SRP9P49458 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
SRP9P49458 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SRP9P49458 SPRR2C-201ENST00000290702 219 ntBASIC3.42□□□□□ -1.86
SRP9P49458 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SRP9P49458 HMGB3P19-201ENST00000403971 560 ntBASIC3.42□□□□□ -1.86
SRP9P49458 RPL21P65-201ENST00000406094 466 ntBASIC3.42□□□□□ -1.86
SRP9P49458 RPL7AP73-201ENST00000413490 353 ntBASIC3.42□□□□□ -1.86
SRP9P49458 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.42□□□□□ -1.86
SRP9P49458 VN1R31P-201ENST00000417498 730 ntBASIC3.42□□□□□ -1.86
SRP9P49458 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP9P49458 RPL21P109-201ENST00000422213 475 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AL691449.1-201ENST00000426570 421 ntBASIC3.42□□□□□ -1.86
SRP9P49458 HIGD1AP4-201ENST00000430194 280 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AL138799.3-201ENST00000438968 350 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AC245517.2-201ENST00000442890 346 ntBASIC3.42□□□□□ -1.86
SRP9P49458 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.42□□□□□ -1.86
SRP9P49458 DNAJC19P1-201ENST00000455312 319 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms