Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RPL5P13-201ENST00000462840 709 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 GAPDHP36-201ENST00000480688 918 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC146944.2-203ENST00000502493 354 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.55□□□□□ -1.68
NEDD4P46934 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.55□□□□□ -1.68
NEDD4P46934 AC010468.3-201ENST00000508225 458 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.55□□□□□ -1.68
NEDD4P46934 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.55□□□□□ -1.68
NEDD4P46934 AC139495.1-202ENST00000513164 354 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
NEDD4P46934 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.55□□□□□ -1.68
NEDD4P46934 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEDD4P46934 OR4A12P-201ENST00000530847 918 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC087888.1-201ENST00000550884 1254 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 HSPE1P5-201ENST00000561489 272 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.55□□□□□ -1.68
NEDD4P46934 AL139089.1-201ENST00000620372 975 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC006249.1-201ENST00000621223 471 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC020978.9-201ENST00000624380 1141 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 AC007342.7-201ENST00000624610 2337 ntBASIC4.55□□□□□ -1.68
NEDD4P46934 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NEDD4P46934 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.55□□□□□ -1.68
NEDD4P46934 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NEDD4P46934 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 FAM35DP-201ENST00000323387 2712 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
NEDD4P46934 RNA5SP97-201ENST00000365006 84 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 RNU6-1320P-201ENST00000390838 107 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RNU6-1269P-201ENST00000391139 107 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 AC092647.1-201ENST00000420654 287 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.54□□□□□ -1.68
NEDD4P46934 KCTD10P1-201ENST00000434203 625 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 AL157827.1-201ENST00000447622 132 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RPS6P2-201ENST00000454208 705 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RNU6-599P-201ENST00000459383 107 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RNU6-1193P-201ENST00000459461 107 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RPL21P11-201ENST00000461458 483 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 AC093853.1-201ENST00000515689 483 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AC022695.1-201ENST00000522089 237 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AC109635.6-201ENST00000525487 1113 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 NOP56P3-201ENST00000549457 385 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.54□□□□□ -1.68
NEDD4P46934 AC090877.1-201ENST00000561418 344 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 MIR5685-201ENST00000579080 79 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
NEDD4P46934 AC084373.1-201ENST00000603311 235 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 HMGB1P50-201ENST00000605814 607 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AC004241.3-201ENST00000611728 517 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AL445493.3-201ENST00000619568 477 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RNU6-368P-201ENST00000620928 107 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 RNU6-538P-201ENST00000622329 107 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AL359715.5-201ENST00000623431 443 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 RPL23AP61-201ENST00000623642 466 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 AL138960.2-201ENST00000625145 535 ntBASIC4.54□□□□□ -1.68
NEDD4P46934 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
NEDD4P46934 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
NEDD4P46934 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
NEDD4P46934 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.54□□□□□ -1.68
NEDD4P46934 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD4P46934 IPO8P1-201ENST00000455509 3109 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NEDD4P46934 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD4P46934 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD4P46934 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NEDD4P46934 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NEDD4P46934 RNU6-609P-201ENST00000365459 107 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 MT-TP-201ENST00000387461 68 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 RPL32P23-201ENST00000397237 405 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.53□□□□□ -1.68
NEDD4P46934 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.53□□□□□ -1.68
NEDD4P46934 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NEDD4P46934 AL445584.1-201ENST00000431451 330 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 AC096638.2-201ENST00000434965 711 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 AC093716.1-201ENST00000435923 377 ntBASIC4.53□□□□□ -1.68
NEDD4P46934 AL356535.1-201ENST00000440335 398 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms