Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.36□□□□□ -1.71
SSR1P43307 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
SSR1P43307 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.36□□□□□ -1.71
SSR1P43307 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.36□□□□□ -1.71
SSR1P43307 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 AC068020.1-201ENST00000594215 661 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC234771.5-201ENST00000600161 514 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC005021.1-201ENST00000608730 355 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC095038.2-201ENST00000621464 1070 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AC008785.1-201ENST00000624475 456 ntBASIC4.36□□□□□ -1.71
SSR1P43307 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.36□□□□□ -1.71
SSR1P43307 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SSR1P43307 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSR1P43307 AC005183.1-201ENST00000603687 1979 ntBASIC4.35□□□□□ -1.71
SSR1P43307 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SSR1P43307 SNORD35B-201ENST00000363660 87 ntBASIC4.35□□□□□ -1.71
SSR1P43307 RNU1-132P-201ENST00000364300 164 ntBASIC4.35□□□□□ -1.71
SSR1P43307 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSR1P43307 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SSR1P43307 GSTA12P-201ENST00000402398 508 ntBASIC4.35□□□□□ -1.71
SSR1P43307 RPS4XP9-201ENST00000405151 780 ntBASIC4.35□□□□□ -1.71
SSR1P43307 RPL37P18-201ENST00000411602 243 ntBASIC4.35□□□□□ -1.71
SSR1P43307 PGBD4P8-201ENST00000412993 562 ntBASIC4.35□□□□□ -1.71
SSR1P43307 RPL26P29-201ENST00000415623 438 ntBASIC4.35□□□□□ -1.71
SSR1P43307 UBE2V2P3-201ENST00000433562 437 ntBASIC4.35□□□□□ -1.71
SSR1P43307 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.35□□□□□ -1.71
SSR1P43307 RPL12P26-201ENST00000452430 487 ntBASIC4.35□□□□□ -1.71
SSR1P43307 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.35□□□□□ -1.71
SSR1P43307 AC005921.1-201ENST00000510589 286 ntBASIC4.35□□□□□ -1.71
SSR1P43307 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.35□□□□□ -1.71
SSR1P43307 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.35□□□□□ -1.71
SSR1P43307 OR4V1P-201ENST00000525394 1140 ntBASIC4.35□□□□□ -1.71
SSR1P43307 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.35□□□□□ -1.71
SSR1P43307 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.35□□□□□ -1.71
SSR1P43307 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.35□□□□□ -1.71
SSR1P43307 AC099778.2-201ENST00000610904 211 ntBASIC4.35□□□□□ -1.71
SSR1P43307 FAM27D1-201ENST00000612308 341 ntBASIC4.35□□□□□ -1.71
SSR1P43307 uc_338.9-201ENST00000617424 182 ntBASIC4.35□□□□□ -1.71
SSR1P43307 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SSR1P43307 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSR1P43307 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.35□□□□□ -1.71
SSR1P43307 ZNF826P-207ENST00000622273 1910 ntBASIC4.34□□□□□ -1.71
SSR1P43307 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.34□□□□□ -1.71
SSR1P43307 RNA5SP509-201ENST00000364577 119 ntBASIC4.34□□□□□ -1.71
SSR1P43307 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.34□□□□□ -1.71
SSR1P43307 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
SSR1P43307 RNU4-25P-201ENST00000410569 230 ntBASIC4.34□□□□□ -1.71
SSR1P43307 RN7SKP182-201ENST00000410772 298 ntBASIC4.34□□□□□ -1.71
SSR1P43307 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSR1P43307 COX6B1P7-201ENST00000430845 235 ntBASIC4.34□□□□□ -1.71
SSR1P43307 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSR1P43307 Z99127.2-201ENST00000441426 334 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.34□□□□□ -1.71
SSR1P43307 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.34□□□□□ -1.71
SSR1P43307 VN1R48P-201ENST00000448149 1036 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.34□□□□□ -1.71
SSR1P43307 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSR1P43307 RN7SL691P-201ENST00000494487 301 ntBASIC4.34□□□□□ -1.71
SSR1P43307 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SSR1P43307 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.34□□□□□ -1.71
SSR1P43307 OR5D17P-201ENST00000531492 978 ntBASIC4.34□□□□□ -1.71
SSR1P43307 PSMB7P1-201ENST00000556349 514 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.34□□□□□ -1.71
SSR1P43307 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.34□□□□□ -1.71
SSR1P43307 MIR4277-201ENST00000578298 84 ntBASIC4.34□□□□□ -1.71
SSR1P43307 MIR4330-201ENST00000579077 105 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.34□□□□□ -1.71
SSR1P43307 AC012417.1-201ENST00000582307 1039 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AC007448.1-201ENST00000582714 234 ntBASIC4.34□□□□□ -1.71
SSR1P43307 NF1P5-201ENST00000588287 448 ntBASIC4.34□□□□□ -1.71
SSR1P43307 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.34□□□□□ -1.71
SSR1P43307 IPO5P1-202ENST00000600039 287 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AL356218.2-201ENST00000605264 187 ntBASIC4.34□□□□□ -1.71
SSR1P43307 AC011944.2-201ENST00000624440 683 ntBASIC4.34□□□□□ -1.71
SSR1P43307 ZNF542P-204ENST00000482727 1305 ntBASIC4.34□□□□□ -1.71
SSR1P43307 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSR1P43307 AP002001.2-201ENST00000529025 1469 ntBASIC4.34□□□□□ -1.71
SSR1P43307 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSR1P43307 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSR1P43307 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSR1P43307 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSR1P43307 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.33□□□□□ -1.72
SSR1P43307 MFSD8-216ENST00000641147 4009 ntBASIC4.33□□□□□ -1.72
SSR1P43307 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSR1P43307 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSR1P43307 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSR1P43307 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSR1P43307 SNORA31-201ENST00000362607 130 ntBASIC4.33□□□□□ -1.72
SSR1P43307 ELOCP19-201ENST00000411919 318 ntBASIC4.33□□□□□ -1.72
SSR1P43307 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.33□□□□□ -1.72
SSR1P43307 RNF19BPX-201ENST00000426224 625 ntBASIC4.33□□□□□ -1.72
SSR1P43307 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.33□□□□□ -1.72
SSR1P43307 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.33□□□□□ -1.72
SSR1P43307 VN1R25P-201ENST00000443385 738 ntBASIC4.33□□□□□ -1.72
SSR1P43307 AC239367.2-201ENST00000447309 705 ntBASIC4.33□□□□□ -1.72
SSR1P43307 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.33□□□□□ -1.72
SSR1P43307 VN1R40P-201ENST00000455196 941 ntBASIC4.33□□□□□ -1.72
SSR1P43307 RN7SL303P-201ENST00000469773 251 ntBASIC4.33□□□□□ -1.72
SSR1P43307 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms