Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AP003717.3-201ENST00000544832 1180 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC006116.7-201ENST00000590141 756 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC097504.2-201ENST00000608088 454 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 BX323046.1-201ENST00000610145 535 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AL713922.2-201ENST00000619384 716 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC090772.4-201ENST00000623599 362 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 LINC00622-201ENST00000562811 1570 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 MFSD8-242ENST00000641690 4199 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 MTCO1P6-201ENST00000481192 1384 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 MTND4P8-201ENST00000514997 1362 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HNF4AP41235 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HNF4AP41235 MIR448-201ENST00000362131 111 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 RNA5SP397-201ENST00000391323 118 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 RPS16P5-201ENST00000406501 404 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC069282.1-201ENST00000411911 526 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 SFR1P2-201ENST00000421841 730 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AL512637.2-201ENST00000431287 1256 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 YWHAEP5-201ENST00000431545 765 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 RPL21P110-201ENST00000433345 446 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 CKS1BP5-201ENST00000434172 273 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 RPL23AP93-201ENST00000440847 484 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 RPL23AP33-201ENST00000442301 452 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 VN1R32P-201ENST00000452234 905 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 TVP23BP2-201ENST00000455082 615 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC010469.1-201ENST00000463864 576 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC108145.1-201ENST00000503770 153 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 TPT1P8-201ENST00000510120 555 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 AF279873.1-201ENST00000523393 313 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC138701.1-201ENST00000524329 714 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 AP001781.1-201ENST00000530977 207 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 OR6C73P-201ENST00000546432 358 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.37□□□□□ -1.71
HNF4AP41235 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 AC008759.1-201ENST00000589783 983 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 SLC25A36P1-201ENST00000590111 465 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AP002360.3-201ENST00000607673 710 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 AC112503.2-201ENST00000609005 552 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.37□□□□□ -1.71
HNF4AP41235 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HNF4AP41235 NOL8P1-201ENST00000508336 3529 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 Z98755.1-201ENST00000407015 1384 ntBASIC4.37□□□□□ -1.71
HNF4AP41235 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HNF4AP41235 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HNF4AP41235 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.37□□□□□ -1.71
HNF4AP41235 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.37□□□□□ -1.71
HNF4AP41235 NXPH1-205ENST00000602349 1953 ntBASIC4.36□□□□□ -1.71
HNF4AP41235 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
HNF4AP41235 RNA5SP505-201ENST00000364748 108 ntBASIC4.36□□□□□ -1.71
HNF4AP41235 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
HNF4AP41235 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
HNF4AP41235 ENSAP1-201ENST00000392855 326 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms