Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.95□□□□□ -1.78
RORAP35398 TPT1P3-201ENST00000492841 512 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.95□□□□□ -1.78
RORAP35398 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.95□□□□□ -1.78
RORAP35398 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.95□□□□□ -1.78
RORAP35398 AC022655.2-201ENST00000577280 318 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.95□□□□□ -1.78
RORAP35398 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.95□□□□□ -1.78
RORAP35398 AC022916.3-201ENST00000592961 742 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC005255.1-201ENST00000593748 216 ntBASIC3.95□□□□□ -1.78
RORAP35398 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.95□□□□□ -1.78
RORAP35398 AC010680.4-201ENST00000605334 543 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC099676.1-201ENST00000608886 657 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC099669.2-201ENST00000616549 437 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC009032.1-201ENST00000617574 431 ntBASIC3.95□□□□□ -1.78
RORAP35398 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.95□□□□□ -1.78
RORAP35398 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.95□□□□□ -1.78
RORAP35398 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RORAP35398 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
RORAP35398 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
RORAP35398 AC008725.1-201ENST00000605123 2263 ntBASIC3.95□□□□□ -1.78
RORAP35398 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC083899.2-201ENST00000423285 1376 ntBASIC3.94□□□□□ -1.78
RORAP35398 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 OR11H4-201ENST00000315409 1082 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
RORAP35398 MIR134-201ENST00000385258 73 ntBASIC3.94□□□□□ -1.78
RORAP35398 RPL32P23-201ENST00000397237 405 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC025750.1-201ENST00000399891 379 ntBASIC3.94□□□□□ -1.78
RORAP35398 AL138878.1-201ENST00000405131 347 ntBASIC3.94□□□□□ -1.78
RORAP35398 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 AP000357.1-201ENST00000409926 1165 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.94□□□□□ -1.78
RORAP35398 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.94□□□□□ -1.78
RORAP35398 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.94□□□□□ -1.78
RORAP35398 AL031663.1-201ENST00000437445 219 ntBASIC3.94□□□□□ -1.78
RORAP35398 MTCYBP12-201ENST00000440559 1134 ntBASIC3.94□□□□□ -1.78
RORAP35398 CDC27P1-201ENST00000445384 715 ntBASIC3.94□□□□□ -1.78
RORAP35398 EXTL2P1-201ENST00000446218 416 ntBASIC3.94□□□□□ -1.78
RORAP35398 AP002345.1-201ENST00000456493 928 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC018635.1-201ENST00000468292 1030 ntBASIC3.94□□□□□ -1.78
RORAP35398 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC108145.1-201ENST00000503770 153 ntBASIC3.94□□□□□ -1.78
RORAP35398 HMGB1P47-201ENST00000511281 589 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 AC016550.3-201ENST00000515706 767 ntBASIC3.94□□□□□ -1.78
RORAP35398 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.94□□□□□ -1.78
RORAP35398 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.94□□□□□ -1.78
RORAP35398 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 AC092851.1-201ENST00000535964 478 ntBASIC3.94□□□□□ -1.78
RORAP35398 RFPL1S-203ENST00000539579 330 ntBASIC3.94□□□□□ -1.78
RORAP35398 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 AGGF1P6-201ENST00000569213 976 ntBASIC3.94□□□□□ -1.78
RORAP35398 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.94□□□□□ -1.78
RORAP35398 AC067852.4-201ENST00000590314 478 ntBASIC3.94□□□□□ -1.78
RORAP35398 AC020914.4-201ENST00000597690 277 ntBASIC3.94□□□□□ -1.78
RORAP35398 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.94□□□□□ -1.78
RORAP35398 AC135803.1-201ENST00000608748 565 ntBASIC3.94□□□□□ -1.78
RORAP35398 AL161637.1-201ENST00000622380 412 ntBASIC3.94□□□□□ -1.78
RORAP35398 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RORAP35398 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.94□□□□□ -1.78
RORAP35398 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.94□□□□□ -1.78
RORAP35398 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RORAP35398 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RORAP35398 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
RORAP35398 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RORAP35398 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RORAP35398 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RORAP35398 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RORAP35398 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
RORAP35398 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RORAP35398 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.93□□□□□ -1.78
RORAP35398 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RORAP35398 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.93□□□□□ -1.78
RORAP35398 TPT1P2-201ENST00000413105 503 ntBASIC3.93□□□□□ -1.78
RORAP35398 JKAMPP1-201ENST00000413804 919 ntBASIC3.93□□□□□ -1.78
RORAP35398 RPL36AP36-201ENST00000418616 301 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms