Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC124947.2-202ENST00000552735 133 ntBASIC6.78□□□□□ -1.32
RXRBP28702 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RXRBP28702 MIR3912-201ENST00000577566 105 ntBASIC6.78□□□□□ -1.32
RXRBP28702 MIR4528-201ENST00000577763 90 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC022916.3-201ENST00000592961 742 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.78□□□□□ -1.32
RXRBP28702 BNIP3P26-201ENST00000600827 554 ntBASIC6.78□□□□□ -1.32
RXRBP28702 BNIP3P9-201ENST00000603714 553 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AL022154.1-201ENST00000604698 785 ntBASIC6.78□□□□□ -1.32
RXRBP28702 CR381653.2-201ENST00000624041 768 ntBASIC6.78□□□□□ -1.32
RXRBP28702 FAM157B-203ENST00000639350 358 ntBASIC6.78□□□□□ -1.32
RXRBP28702 MFSD8-245ENST00000641743 948 ntBASIC6.78□□□□□ -1.32
RXRBP28702 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
RXRBP28702 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.78□□□□□ -1.32
RXRBP28702 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.78□□□□□ -1.32
RXRBP28702 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RXRBP28702 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RXRBP28702 UGT2B24P-201ENST00000514441 1597 ntBASIC6.78□□□□□ -1.32
RXRBP28702 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.77□□□□□ -1.32
RXRBP28702 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RXRBP28702 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
RXRBP28702 AP005901.5-201ENST00000545779 1796 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC093909.5-201ENST00000621839 1799 ntBASIC6.77□□□□□ -1.33
RXRBP28702 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RXRBP28702 RN7SKP226-201ENST00000364912 300 ntBASIC6.77□□□□□ -1.33
RXRBP28702 RNU6-549P-201ENST00000384433 107 ntBASIC6.77□□□□□ -1.33
RXRBP28702 Y_RNA.509-201ENST00000384506 99 ntBASIC6.77□□□□□ -1.33
RXRBP28702 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.77□□□□□ -1.33
RXRBP28702 CIR1P3-201ENST00000405137 479 ntBASIC6.77□□□□□ -1.33
RXRBP28702 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.77□□□□□ -1.33
RXRBP28702 RNU2-65P-201ENST00000410162 185 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC002524.1-201ENST00000411687 547 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 AF186996.5-201ENST00000418098 904 ntBASIC6.77□□□□□ -1.33
RXRBP28702 MTCYBP24-201ENST00000420387 1106 ntBASIC6.77□□□□□ -1.33
RXRBP28702 OFD1P18Y-201ENST00000420889 959 ntBASIC6.77□□□□□ -1.33
RXRBP28702 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.77□□□□□ -1.33
RXRBP28702 RPS12P10-201ENST00000427031 377 ntBASIC6.77□□□□□ -1.33
RXRBP28702 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 CBX1P1-201ENST00000440184 427 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.77□□□□□ -1.33
RXRBP28702 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.77□□□□□ -1.33
RXRBP28702 CYCSP34-201ENST00000458172 304 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 KLF3P2-201ENST00000465138 268 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC146507.1-201ENST00000468335 354 ntBASIC6.77□□□□□ -1.33
RXRBP28702 UBTFL6-201ENST00000477929 1024 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC092989.1-201ENST00000481235 277 ntBASIC6.77□□□□□ -1.33
RXRBP28702 RPL9P6-201ENST00000492764 598 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 RNU6-314P-201ENST00000516574 104 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.77□□□□□ -1.33
RXRBP28702 AC137627.1-201ENST00000545761 289 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.77□□□□□ -1.33
RXRBP28702 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RXRBP28702 AL365503.1-201ENST00000605247 905 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC104458.1-201ENST00000608243 463 ntBASIC6.77□□□□□ -1.33
RXRBP28702 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.77□□□□□ -1.33
RXRBP28702 PART1_1.1-201ENST00000611761 217 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC011472.4-201ENST00000615848 491 ntBASIC6.77□□□□□ -1.33
RXRBP28702 AC063952.1-203ENST00000634410 658 ntBASIC6.77□□□□□ -1.33
RXRBP28702 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
RXRBP28702 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.77□□□□□ -1.33
RXRBP28702 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RXRBP28702 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.77□□□□□ -1.33
RXRBP28702 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RXRBP28702 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RXRBP28702 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.76□□□□□ -1.33
RXRBP28702 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 MAPK10-270ENST00000641102 3538 ntBASIC6.76□□□□□ -1.33
RXRBP28702 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
RXRBP28702 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.76□□□□□ -1.33
RXRBP28702 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RXRBP28702 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.76□□□□□ -1.33
RXRBP28702 CBX3P1-201ENST00000325243 554 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms