Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC100778.3-201ENST00000580060 1750 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC135352.1-201ENST00000506173 1418 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC011755.1-201ENST00000623763 2049 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 NACA3P-201ENST00000359690 648 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC068538.1-201ENST00000376856 336 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 RNU6-413P-201ENST00000384115 107 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AL355379.1-201ENST00000405542 640 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AF274854.1-201ENST00000413236 615 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 RPL7AP25-201ENST00000423357 805 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 CHIAP3-201ENST00000423668 1133 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AL050341.1-201ENST00000447743 313 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC009961.3-201ENST00000449832 765 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC097262.1-201ENST00000452559 548 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AL035407.2-201ENST00000454090 378 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC069528.1-202ENST00000482888 637 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC109635.6-201ENST00000525487 1113 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC010198.2-201ENST00000550612 259 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 PARP1P2-201ENST00000556806 195 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AADACP1-206ENST00000561502 1193 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC090616.2-202ENST00000584248 222 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AL592148.2-201ENST00000612210 372 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC122133.1-201ENST00000613964 233 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 AC025031.4-201ENST00000621248 3271 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-DOAP06340 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HLA-DOAP06340 UGT2B26P-201ENST00000508672 1613 ntBASIC5.45□□□□□ -1.54
HLA-DOAP06340 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 Z75741.2-201ENST00000417272 1167 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC004690.1-201ENST00000418216 328 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AL356387.2-201ENST00000422272 243 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC019178.2-201ENST00000423595 505 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 RPL21P43-201ENST00000425440 472 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC098826.1-201ENST00000433943 471 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 NMNAT1P2-201ENST00000435192 860 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 RPL23AP93-201ENST00000440847 484 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 NPM1P49-201ENST00000448027 714 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 BTF3P6-201ENST00000448054 499 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC011276.1-201ENST00000469688 323 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 RPL21P126-201ENST00000470049 478 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 CR383656.1-201ENST00000484916 377 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC083829.1-201ENST00000503756 657 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC008565.1-201ENST00000509046 885 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DOAP06340 RN7SKP122-201ENST00000515923 296 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 IGLVIV-65-201ENST00000517313 360 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 OR5D2P-201ENST00000524390 911 ntBASIC5.44□□□□□ -1.54
HLA-DOAP06340 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DOAP06340 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms