Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CFTRP2-201ENST00000634304 199 ntBASIC4.41□□□□□ -1.7
CHRNA1P02708 AC009452.1-201ENST00000640823 606 ntBASIC4.41□□□□□ -1.7
CHRNA1P02708 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CHRNA1P02708 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA1P02708 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA1P02708 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA1P02708 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
CHRNA1P02708 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA1P02708 MTND4P26-201ENST00000415971 1359 ntBASIC4.4□□□□□ -1.7
CHRNA1P02708 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA1P02708 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.7
CHRNA1P02708 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHRNA1P02708 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.4□□□□□ -1.7
CHRNA1P02708 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC067945.1-201ENST00000342609 618 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 RNU1-15P-201ENST00000353977 144 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 MIR208A-201ENST00000362287 71 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 SNORD35B-201ENST00000363660 87 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 RNA5SP239-201ENST00000410218 129 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC073335.1-201ENST00000427776 363 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AC073069.1-201ENST00000428657 441 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 MTND2P21-201ENST00000436242 1042 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 RPL7P31-201ENST00000450192 724 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA1P02708 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.4□□□□□ -1.71
CHRNA1P02708 RN7SL323P-201ENST00000494712 295 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC093853.1-201ENST00000515689 483 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 MYL12AP1-201ENST00000518490 515 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 NDUFA5P2-201ENST00000519723 344 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 HMGB1P46-201ENST00000520062 610 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.4□□□□□ -1.71
CHRNA1P02708 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.4□□□□□ -1.71
CHRNA1P02708 MTND6P33-201ENST00000571794 183 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AC015726.1-201ENST00000602353 681 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AC091167.4-201ENST00000605079 184 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.4□□□□□ -1.71
CHRNA1P02708 AC004825.2-201ENST00000616634 455 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AL669942.2-201ENST00000620352 697 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AC138907.10-201ENST00000623708 983 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 AC004777.1-201ENST00000624317 287 ntBASIC4.4□□□□□ -1.71
CHRNA1P02708 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA1P02708 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.4□□□□□ -1.71
CHRNA1P02708 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA1P02708 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHRNA1P02708 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA1P02708 KPNA2P2-201ENST00000419546 1489 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 U8.11-201ENST00000384699 133 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 U8.12-201ENST00000384701 133 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 MIR449B-201ENST00000384995 97 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA1P02708 RN7SKP156-201ENST00000410308 342 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 RPS3AP25-201ENST00000411660 793 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA1P02708 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA1P02708 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.39□□□□□ -1.71
CHRNA1P02708 U8.18-201ENST00000459285 133 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AC010469.1-201ENST00000463864 576 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 RPS26P28-201ENST00000470806 348 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA1P02708 AC008083.2-201ENST00000546707 476 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA1P02708 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA1P02708 AL049870.4-201ENST00000555741 486 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA1P02708 MIR4716-201ENST00000579628 84 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.39□□□□□ -1.71
CHRNA1P02708 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 PSMA6P4-201ENST00000603247 718 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AC015813.4-201ENST00000610469 179 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AC078899.5-201ENST00000612475 178 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA1P02708 AL162233.1-201ENST00000620014 944 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 AP005264.7-201ENST00000625003 745 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CHRNA1P02708 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CHRNA1P02708 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA1P02708 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHRNA1P02708 Z82217.1-201ENST00000625157 8149 ntBASIC4.39□□□□□ -1.71
CHRNA1P02708 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.39□□□□□ -1.71
CHRNA1P02708 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.39□□□□□ -1.71
CHRNA1P02708 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
CHRNA1P02708 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA1P02708 DDX6P1-205ENST00000441966 1436 ntBASIC4.38□□□□□ -1.71
CHRNA1P02708 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHRNA1P02708 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHRNA1P02708 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CHRNA1P02708 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHRNA1P02708 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHRNA1P02708 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms