Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.41□□□□□ -1.38
CUX2O14529 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.41□□□□□ -1.38
CUX2O14529 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CUX2O14529 AC084759.1-201ENST00000561168 290 ntBASIC6.41□□□□□ -1.38
CUX2O14529 EIF5A2P1-201ENST00000564027 460 ntBASIC6.41□□□□□ -1.38
CUX2O14529 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.41□□□□□ -1.38
CUX2O14529 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.41□□□□□ -1.38
CUX2O14529 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.41□□□□□ -1.38
CUX2O14529 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CUX2O14529 MAPK10-303ENST00000641324 3959 ntBASIC6.41□□□□□ -1.38
CUX2O14529 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CUX2O14529 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.41□□□□□ -1.38
CUX2O14529 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CUX2O14529 RNU1-15P-201ENST00000353977 144 ntBASIC6.41□□□□□ -1.38
CUX2O14529 RNU4-35P-201ENST00000362588 141 ntBASIC6.41□□□□□ -1.38
CUX2O14529 RNU1-140P-201ENST00000365040 165 ntBASIC6.41□□□□□ -1.38
CUX2O14529 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.41□□□□□ -1.38
CUX2O14529 HMGB3P9-201ENST00000441799 583 ntBASIC6.41□□□□□ -1.38
CUX2O14529 AC005002.1-201ENST00000447458 540 ntBASIC6.41□□□□□ -1.38
CUX2O14529 FTH1P11-201ENST00000517577 551 ntBASIC6.41□□□□□ -1.38
CUX2O14529 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.41□□□□□ -1.38
CUX2O14529 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.41□□□□□ -1.38
CUX2O14529 AL121594.4-201ENST00000556211 1196 ntBASIC6.41□□□□□ -1.38
CUX2O14529 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.41□□□□□ -1.38
CUX2O14529 AC104662.1-201ENST00000604448 511 ntBASIC6.41□□□□□ -1.38
CUX2O14529 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.4□□□□□ -1.38
CUX2O14529 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CUX2O14529 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC6.4□□□□□ -1.38
CUX2O14529 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CUX2O14529 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.4□□□□□ -1.39
CUX2O14529 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CUX2O14529 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CUX2O14529 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.39
CUX2O14529 SNORA44-201ENST00000384584 132 ntBASIC6.4□□□□□ -1.39
CUX2O14529 VDAC2P1-201ENST00000399358 958 ntBASIC6.4□□□□□ -1.39
CUX2O14529 HDGFP1-201ENST00000405943 252 ntBASIC6.4□□□□□ -1.39
CUX2O14529 RANP8-201ENST00000444720 713 ntBASIC6.4□□□□□ -1.39
CUX2O14529 OR52Y1P-201ENST00000452418 828 ntBASIC6.4□□□□□ -1.39
CUX2O14529 CCDC75P1-201ENST00000469247 791 ntBASIC6.4□□□□□ -1.39
CUX2O14529 AC093663.1-201ENST00000497190 394 ntBASIC6.4□□□□□ -1.39
CUX2O14529 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC6.4□□□□□ -1.39
CUX2O14529 AC138409.2-202ENST00000507274 458 ntBASIC6.4□□□□□ -1.39
CUX2O14529 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.4□□□□□ -1.39
CUX2O14529 Y_RNA.676-201ENST00000516393 96 ntBASIC6.4□□□□□ -1.39
CUX2O14529 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CUX2O14529 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.4□□□□□ -1.39
CUX2O14529 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CUX2O14529 SMG1P4-204ENST00000523028 4131 ntBASIC6.39□□□□□ -1.39
CUX2O14529 AL355596.1-201ENST00000565399 3996 ntBASIC6.39□□□□□ -1.39
CUX2O14529 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CUX2O14529 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CUX2O14529 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CUX2O14529 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CUX2O14529 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.39□□□□□ -1.39
CUX2O14529 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.39□□□□□ -1.39
CUX2O14529 SRIP2-201ENST00000428470 166 ntBASIC6.39□□□□□ -1.39
CUX2O14529 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.39□□□□□ -1.39
CUX2O14529 RPS17P13-201ENST00000448974 407 ntBASIC6.39□□□□□ -1.39
CUX2O14529 RPL26P28-201ENST00000451325 435 ntBASIC6.39□□□□□ -1.39
CUX2O14529 RPL31P50-201ENST00000471002 296 ntBASIC6.39□□□□□ -1.39
CUX2O14529 PTGES3P3-201ENST00000511479 482 ntBASIC6.39□□□□□ -1.39
CUX2O14529 MTND6P33-201ENST00000571794 183 ntBASIC6.39□□□□□ -1.39
CUX2O14529 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.39□□□□□ -1.39
CUX2O14529 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC6.39□□□□□ -1.39
CUX2O14529 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CUX2O14529 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUX2O14529 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC6.38□□□□□ -1.39
CUX2O14529 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.38□□□□□ -1.39
CUX2O14529 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CUX2O14529 RN7SKP199-201ENST00000410325 305 ntBASIC6.38□□□□□ -1.39
CUX2O14529 AC117434.1-201ENST00000419971 836 ntBASIC6.38□□□□□ -1.39
CUX2O14529 EIF4EP1-201ENST00000422311 642 ntBASIC6.38□□□□□ -1.39
CUX2O14529 REREP1Y-201ENST00000422655 198 ntBASIC6.38□□□□□ -1.39
CUX2O14529 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.38□□□□□ -1.39
CUX2O14529 REREP2Y-201ENST00000439103 200 ntBASIC6.38□□□□□ -1.39
CUX2O14529 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.38□□□□□ -1.39
CUX2O14529 AC006517.1-201ENST00000480485 328 ntBASIC6.38□□□□□ -1.39
CUX2O14529 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.38□□□□□ -1.39
CUX2O14529 AL360157.1-201ENST00000565962 87 ntBASIC6.38□□□□□ -1.39
CUX2O14529 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.38□□□□□ -1.39
CUX2O14529 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC6.38□□□□□ -1.39
CUX2O14529 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CUX2O14529 HSPD1P11-201ENST00000508643 1702 ntBASIC6.38□□□□□ -1.39
CUX2O14529 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CUX2O14529 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CUX2O14529 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
CUX2O14529 RNU1-108P-201ENST00000362556 161 ntBASIC6.37□□□□□ -1.39
CUX2O14529 RPL5P18-201ENST00000406671 891 ntBASIC6.37□□□□□ -1.39
CUX2O14529 RN7SKP222-201ENST00000410651 315 ntBASIC6.37□□□□□ -1.39
CUX2O14529 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.37□□□□□ -1.39
CUX2O14529 Z75741.1-201ENST00000446793 314 ntBASIC6.37□□□□□ -1.39
CUX2O14529 UBL5P3-201ENST00000475112 231 ntBASIC6.37□□□□□ -1.39
CUX2O14529 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.37□□□□□ -1.39
CUX2O14529 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.37□□□□□ -1.39
CUX2O14529 AC022695.1-201ENST00000522089 237 ntBASIC6.37□□□□□ -1.39
CUX2O14529 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms