Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.13□□□□□ -1.91
SDCBPO00560 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
SDCBPO00560 PRO1804-201ENST00000623780 2050 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.13□□□□□ -1.91
SDCBPO00560 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.12□□□□□ -1.91
SDCBPO00560 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDCBPO00560 SNORA70.2-201ENST00000364506 135 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 RNA5SP283-201ENST00000365604 119 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 AC068538.1-201ENST00000376856 336 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 MIR184-201ENST00000384962 84 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SDCBPO00560 AL136116.1-201ENST00000403591 381 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 RNU6-233P-201ENST00000410845 141 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 OR4C10P-201ENST00000434991 931 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 RPL12P46-201ENST00000436610 195 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.12□□□□□ -1.91
SDCBPO00560 SETD6P1-201ENST00000444575 317 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.12□□□□□ -1.91
SDCBPO00560 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.12□□□□□ -1.91
SDCBPO00560 AC004801.2-202ENST00000463559 283 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 S100A11P1-201ENST00000477525 312 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.12□□□□□ -1.91
SDCBPO00560 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.12□□□□□ -1.91
SDCBPO00560 AC010460.1-201ENST00000507087 466 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.12□□□□□ -1.91
SDCBPO00560 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.12□□□□□ -1.91
SDCBPO00560 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.12□□□□□ -1.91
SDCBPO00560 AC006960.3-201ENST00000561845 705 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 MTND2P13-201ENST00000577438 1039 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDCBPO00560 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.12□□□□□ -1.91
SDCBPO00560 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.12□□□□□ -1.91
SDCBPO00560 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.12□□□□□ -1.91
SDCBPO00560 AL163642.2-201ENST00000604722 1019 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 SNORA62.6-201ENST00000606322 83 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 OR6R2P-201ENST00000609216 300 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 AL592295.2-201ENST00000612578 206 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 ZYXP1-201ENST00000617638 118 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
SDCBPO00560 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.12□□□□□ -1.91
SDCBPO00560 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDCBPO00560 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDCBPO00560 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SDCBPO00560 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.12□□□□□ -1.91
SDCBPO00560 BX005019.1-201ENST00000561881 1810 ntBASIC3.12□□□□□ -1.91
SDCBPO00560 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.11□□□□□ -1.91
SDCBPO00560 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 FAM91A3P-201ENST00000456826 2544 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 RNU6-213P-201ENST00000384051 104 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 RNA5SP424-201ENST00000390988 115 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.11□□□□□ -1.91
SDCBPO00560 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.11□□□□□ -1.91
SDCBPO00560 RSL24D1P6-201ENST00000426934 401 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SDCBPO00560 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 AC006480.1-201ENST00000449887 378 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 RN7SL385P-201ENST00000468873 276 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 RN7SL323P-201ENST00000494712 295 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 AC092045.1-201ENST00000495716 1231 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 AC108064.1-201ENST00000513791 460 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.11□□□□□ -1.91
SDCBPO00560 AC008011.1-201ENST00000545989 227 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 TRAV15-201ENST00000556680 249 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 MIR4286-201ENST00000580651 93 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.11□□□□□ -1.91
SDCBPO00560 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.11□□□□□ -1.91
SDCBPO00560 MIR6875-201ENST00000617506 72 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 AC105105.5-201ENST00000622635 1294 ntBASIC3.11□□□□□ -1.91
SDCBPO00560 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.11□□□□□ -1.91
SDCBPO00560 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SDCBPO00560 CYP1D1P-201ENST00000416662 1433 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 MFSD8-220ENST00000641243 1422 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
SDCBPO00560 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SDCBPO00560 SAGE2P-201ENST00000420011 2126 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SDCBPO00560 RNA5SP235-201ENST00000365411 114 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 SNORA3.3-201ENST00000408712 125 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 RNA5SP239-201ENST00000410218 129 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 Y_RNA.625-201ENST00000411256 107 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.1□□□□□ -1.91
SDCBPO00560 AL390879.2-203ENST00000426943 1121 ntBASIC3.1□□□□□ -1.91
SDCBPO00560 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms