Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC008033.2-201ENST00000542626 177 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC093519.1-201ENST00000566109 298 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC138915.2-201ENST00000569776 97 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC022069.1-201ENST00000582910 658 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 MIR3936-201ENST00000584304 110 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC006539.2-201ENST00000601729 572 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 DPRXP5-201ENST00000604662 539 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 HSPE1P14-201ENST00000605812 302 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 AC023158.2-201ENST00000614876 543 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC015871.5-202ENST00000623252 701 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC091905.4-201ENST00000623432 202 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC112694.2-201ENST00000623697 768 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.16□□□□□ -1.58
FOXN3O00409 CR381572.2-201ENST00000624852 397 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.16□□□□□ -1.58
FOXN3O00409 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.16□□□□□ -1.58
FOXN3O00409 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 MTND5P31-201ENST00000419366 1374 ntBASIC5.16□□□□□ -1.58
FOXN3O00409 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
FOXN3O00409 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.15□□□□□ -1.58
FOXN3O00409 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXN3O00409 RARSP1-201ENST00000542842 1418 ntBASIC5.15□□□□□ -1.58
FOXN3O00409 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
FOXN3O00409 AL049555.1-201ENST00000562834 1933 ntBASIC5.15□□□□□ -1.58
FOXN3O00409 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
FOXN3O00409 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
FOXN3O00409 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXN3O00409 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
FOXN3O00409 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
FOXN3O00409 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
FOXN3O00409 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
FOXN3O00409 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
FOXN3O00409 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 RNU6-444P-201ENST00000383988 108 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 RAP1BP1-201ENST00000412709 553 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 MTND4P22-201ENST00000413116 1169 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 FCF1P2-201ENST00000415284 583 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXN3O00409 LINC00993-201ENST00000420453 540 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 MTCO3P1-205ENST00000422088 832 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 NMNAT1P2-201ENST00000435192 860 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 PSMD10P3-201ENST00000437000 448 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 AC026348.1-201ENST00000462549 1053 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 OR52A4P-201ENST00000472867 958 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 GAPDHP36-201ENST00000480688 918 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 GAPDHP56-201ENST00000506031 988 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 AC025674.1-201ENST00000507074 324 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC109445.1-201ENST00000512356 383 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 BTF3P13-201ENST00000513224 490 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.15□□□□□ -1.59
FOXN3O00409 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 OSBPL9P5-201ENST00000542581 171 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 HMGN2P6-201ENST00000551091 273 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 DUXAP1-201ENST00000556632 463 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 HNRNPCP4-201ENST00000571636 900 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 AC093765.1-201ENST00000603758 881 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC123768.4-201ENST00000616244 701 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC004943.3-201ENST00000624116 600 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
FOXN3O00409 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXN3O00409 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.15□□□□□ -1.59
FOXN3O00409 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
FOXN3O00409 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.15□□□□□ -1.59
FOXN3O00409 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
FOXN3O00409 IRF5P1-201ENST00000504852 2164 ntBASIC5.15□□□□□ -1.59
FOXN3O00409 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms