Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AL080312.1-201ENST00000256654 824 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 SNORA70E-201ENST00000384492 135 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 MRPL50P2-201ENST00000416821 482 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 MFSD13B-201ENST00000420133 1290 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 Z82198.3-201ENST00000421145 199 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 HIGD1AP12-201ENST00000427832 281 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC109583.1-201ENST00000432156 268 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 RHOT1P3-201ENST00000436571 331 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 CNOT7P2-201ENST00000441051 832 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL7P52-201ENST00000449200 742 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC146507.2-201ENST00000460608 476 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL37P6-202ENST00000464216 403 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AF213884.1-201ENST00000488102 463 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 PTGES3P3-201ENST00000511479 482 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SKP66-201ENST00000516681 231 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC008489.1-201ENST00000524271 483 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 OR4A12P-201ENST00000530847 918 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 PTP4A1P6-201ENST00000531034 478 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AP004607.5-201ENST00000532034 217 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC004825.1-201ENST00000555068 586 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 NF1P5-201ENST00000588287 448 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AC022079.2-201ENST00000619739 566 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AP005019.3-201ENST00000620418 560 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 RNF6P1-201ENST00000444889 1784 ntBASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 MTND5P3-201ENST00000438536 1800 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC073073.2-201ENST00000609827 2578 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 SNORA7.2-201ENST00000364446 145 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 U3.36-201ENST00000408418 213 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SKP156-201ENST00000410308 342 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RNA5SP31-201ENST00000411144 127 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC004022.2-201ENST00000413824 193 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL138878.2-201ENST00000440581 1241 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RANP8-201ENST00000444720 713 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL162591.2-201ENST00000449634 317 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC009963.2-201ENST00000453431 138 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC063943.1-201ENST00000465434 453 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL7P1-201ENST00000468161 747 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL7P9-201ENST00000468715 747 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 HMGN2P13-201ENST00000476476 274 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RPL23AP73-201ENST00000492507 471 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 FCF1P3-201ENST00000496394 590 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 KLHL2P1-201ENST00000508691 521 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC098799.2-201ENST00000509466 868 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 RN7SKP276-201ENST00000516242 268 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC116917.1-201ENST00000520558 305 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 AL121766.1-201ENST00000547436 487 ntBASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHKB-CPT1BH3BT56 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms