Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 UBE2CP3-201ENST00000502715 450 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC093770.1-201ENST00000511559 571 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 RNU1-95P-201ENST00000516357 160 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 RNU1-128P-201ENST00000516704 160 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AC005972.3-201ENST00000606304 481 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 RNU1-30P-201ENST00000606575 163 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 MIR92B-201ENST00000607575 96 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL391497.1-201ENST00000608671 547 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL596275.2-204ENST00000641628 552 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 AL596275.2-206ENST00000641957 626 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 DDX6P1-205ENST00000441966 1436 ntBASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMIM28A0A1B0GU29 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 SNORD3H-201ENST00000384486 214 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 RNA5SP171-201ENST00000391071 115 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 TCEA1P2-201ENST00000420496 906 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 MTND2P2-201ENST00000434633 945 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC096638.2-201ENST00000434965 711 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 MTCO3P43-201ENST00000440974 771 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC245517.2-201ENST00000442890 346 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC022795.1-201ENST00000473808 480 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC108157.1-201ENST00000510511 539 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 RAC1P2-201ENST00000511164 579 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 NDUFB4P12-201ENST00000513465 390 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC016550.3-201ENST00000515706 767 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 RNU6-889P-201ENST00000517189 103 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC090877.1-201ENST00000561418 344 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AP004372.1-201ENST00000604842 844 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 SNORA62.6-201ENST00000606322 83 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AL354760.1-201ENST00000608357 643 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC079684.1-201ENST00000621405 437 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC015908.5-201ENST00000623289 343 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 ATE1-AS1-202ENST00000636460 506 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AL163152.1-201ENST00000642001 374 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 IPO8P1-201ENST00000455509 3109 ntBASIC4.09□□□□□ -1.75
SMIM28A0A1B0GU29 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.09□□□□□ -1.76
SMIM28A0A1B0GU29 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SMIM28A0A1B0GU29 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.09□□□□□ -1.76
SMIM28A0A1B0GU29 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMIM28A0A1B0GU29 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SMIM28A0A1B0GU29 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 MIR670-201ENST00000390142 98 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC007066.1-201ENST00000392902 381 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 SOD2P1-201ENST00000396543 562 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 RPL21P17-201ENST00000397467 475 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 RPL26P37-201ENST00000411983 438 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 SETP15-201ENST00000412724 337 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 RPL37P1-201ENST00000432310 284 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 ZFAND6P1-201ENST00000434138 605 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 VN1R34P-201ENST00000447387 883 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 RPL7P15-201ENST00000461190 712 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC025181.1-201ENST00000477507 416 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC084198.1-201ENST00000477747 402 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC074050.1-201ENST00000563247 211 ntBASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMIM28A0A1B0GU29 AC244505.7-201ENST00000599675 272 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms