Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TRAV27A0A087WT01 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 OR4A15-201ENST00000314706 1035 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 RPL32P23-201ENST00000397237 405 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AL138878.1-201ENST00000405131 347 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 RAB9AP4-201ENST00000415230 609 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 MTND4LP13-201ENST00000425022 298 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 MRPS18BP2-201ENST00000434310 759 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC006511.1-201ENST00000470614 315 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 FCF1P3-201ENST00000496394 590 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC007424.1-203ENST00000554613 687 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 Z82195.1-201ENST00000604558 398 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 AL136295.6-201ENST00000610486 658 ntBASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAV27A0A087WT01 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC010329.2-201ENST00000595195 2737 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC008725.1-201ENST00000605123 2263 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC007685.1-201ENST00000329806 452 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 SNORA70.2-201ENST00000364506 135 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 Z98941.1-201ENST00000407764 100 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 RN7SKP156-201ENST00000410308 342 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 MTND4P22-201ENST00000413116 1169 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 OR6K4P-201ENST00000423179 955 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 CASP3P1-201ENST00000446037 609 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC239809.1-201ENST00000450470 217 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AL645939.1-201ENST00000453429 797 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AL133162.1-201ENST00000463228 453 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC007991.1-201ENST00000522680 631 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 OR8R1P-201ENST00000543943 764 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 PARP1P2-201ENST00000556806 195 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 MIR5187-201ENST00000583479 76 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AC244505.7-201ENST00000599675 272 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 RNVU1-4-201ENST00000612985 164 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 MTND4P10-201ENST00000446199 1363 ntBASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAV27A0A087WT01 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC114546.3-201ENST00000623582 1734 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 RNA5SP239-201ENST00000410218 129 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC127526.1-201ENST00000417526 366 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AC245054.1-201ENST00000420944 258 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 SDCBPP2-201ENST00000424643 885 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AL158071.1-201ENST00000430315 461 ntBASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.24□□□□□ -1.89
TRAV27A0A087WT01 H2AFZP6-201ENST00000444403 394 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms