Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nr1h3Q9Z0Y9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nr1h3Q9Z0Y9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm6443-201ENSMUST00000203599 874 ntBASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm10052-201ENSMUST00000168019 960 ntBASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm7729-201ENSMUST00000050143 801 ntBASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nr1h3Q9Z0Y9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm13884-201ENSMUST00000118103 829 ntBASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Rprl3-201ENSMUST00000157400 290 ntBASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm37444-201ENSMUST00000193605 439 ntBASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Gm43514-201ENSMUST00000198852 424 ntBASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nr1h3Q9Z0Y9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nr1h3Q9Z0Y9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nr1h3Q9Z0Y9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nr1h3Q9Z0Y9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms