Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim42Q9D2H5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Mtag2-201ENSMUST00000058665 714 ntBASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim42Q9D2H5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim42Q9D2H5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim42Q9D2H5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Gm15375-201ENSMUST00000119510 849 ntBASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Rab3c-203ENSMUST00000224180 967 ntBASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trim42Q9D2H5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms